(44 nodes) African trypanosomiasis network (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPCAP00000015472	annotation not available (121 aa)
	CYGB	Cytoglobin. (142 aa)
	PLCB2	Phospholipase C beta 2. (1084 aa)
	PRKCG	Protein kinase C gamma. (697 aa)
	PLCB3	Phospholipase C beta 3. (1229 aa)
	LAMA4	Laminin subunit alpha 4. (1820 aa)
	APOA1	Apolipoprotein A1. (263 aa)
	ENSPCAP00000001583	annotation not available (143 aa)
	HBQ1	Hemoglobin subunit theta 1. (110 aa)
	ENSPCAP00000002309	annotation not available (530 aa)
	ENSPCAP00000002998	annotation not available (239 aa)
	ENSPCAP00000003450	Myoglobin. (154 aa)
	ENSPCAP00000003493	annotation not available (312 aa)
	IDO2	Indoleamine 2,3-dioxygenase 2. (404 aa)
	AADACL2	Arylacetamide deacetylase like 2. (379 aa)
	PRKCB	Protein kinase C beta. (673 aa)
	AADAC	Arylacetamide deacetylase. (398 aa)
	ENSPCAP00000006142	annotation not available (368 aa)
	KNG1	Kininogen 1. (641 aa)
	TNF	Tumor necrosis factor. (232 aa)
	ENSPCAP00000007041	annotation not available (175 aa)
	ENSPCAP00000007300	annotation not available (212 aa)
	ENSPCAP00000007335	annotation not available (100 aa)
	ENSPCAP00000007574	annotation not available (308 aa)
	IL10	Interleukin 10. (177 aa)
	ENSPCAP00000008651	annotation not available (189 aa)
	ENSPCAP00000009028	annotation not available (320 aa)
	ENSPCAP00000009766	annotation not available (359 aa)
	IL12B	Interleukin 12B. (329 aa)
	PLCB1	Phospholipase C beta 1. (1215 aa)
	IFNG	Interferon gamma. (166 aa)
	PLCB4	Phospholipase C beta 4. (1044 aa)
	NPPA	Natriuretic peptide A. (180 aa)
	IDO1	Indoleamine 2,3-dioxygenase 1. (388 aa)
	ENSPCAP00000012735	annotation not available (149 aa)
	MYD88	MYD88 innate immune signal transduction adaptor. (285 aa)
	F2RL1	F2R like trypsin receptor 1. (397 aa)
	ENSPCAP00000013749	annotation not available (200 aa)
	ENSPCAP00000014062	annotation not available (123 aa)
	SELE	Selectin E. (610 aa)
	ENSPCAP00000014913	annotation not available (147 aa)
	ENSPCAP00000015159	annotation not available (655 aa)
	PRKCA	Protein kinase C alpha. (609 aa)
	ENSPCAP00000016128	annotation not available (146 aa)

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AADAC	ENSPCAP00000003493	ENSPCAP00000005789	ENSPCAP00000003493	Arylacetamide deacetylase.	annotation not available	0.439
AADAC	F2RL1	ENSPCAP00000005789	ENSPCAP00000013672	Arylacetamide deacetylase.	F2R like trypsin receptor 1.	0.486
AADAC	IDO1	ENSPCAP00000005789	ENSPCAP00000012507	Arylacetamide deacetylase.	Indoleamine 2,3-dioxygenase 1.	0.471
AADAC	IDO2	ENSPCAP00000005789	ENSPCAP00000003962	Arylacetamide deacetylase.	Indoleamine 2,3-dioxygenase 2.	0.484
AADAC	PLCB1	ENSPCAP00000005789	ENSPCAP00000010598	Arylacetamide deacetylase.	Phospholipase C beta 1.	0.452
AADACL2	ENSPCAP00000003493	ENSPCAP00000004911	ENSPCAP00000003493	Arylacetamide deacetylase like 2.	annotation not available	0.439
AADACL2	F2RL1	ENSPCAP00000004911	ENSPCAP00000013672	Arylacetamide deacetylase like 2.	F2R like trypsin receptor 1.	0.486
AADACL2	IDO1	ENSPCAP00000004911	ENSPCAP00000012507	Arylacetamide deacetylase like 2.	Indoleamine 2,3-dioxygenase 1.	0.471
AADACL2	IDO2	ENSPCAP00000004911	ENSPCAP00000003962	Arylacetamide deacetylase like 2.	Indoleamine 2,3-dioxygenase 2.	0.484
AADACL2	PLCB1	ENSPCAP00000004911	ENSPCAP00000010598	Arylacetamide deacetylase like 2.	Phospholipase C beta 1.	0.452
CYGB	ENSPCAP00000003450	ENSPCAP00000000223	ENSPCAP00000003450	Cytoglobin.	Myoglobin.	0.569
CYGB	ENSPCAP00000009766	ENSPCAP00000000223	ENSPCAP00000009766	Cytoglobin.	annotation not available	0.445
ENSPCAP00000001583	ENSPCAP00000006142	ENSPCAP00000001583	ENSPCAP00000006142	annotation not available	annotation not available	0.465
ENSPCAP00000001583	ENSPCAP00000007335	ENSPCAP00000001583	ENSPCAP00000007335	annotation not available	annotation not available	0.977
ENSPCAP00000001583	ENSPCAP00000009766	ENSPCAP00000001583	ENSPCAP00000009766	annotation not available	annotation not available	0.984
ENSPCAP00000001583	ENSPCAP00000014062	ENSPCAP00000001583	ENSPCAP00000014062	annotation not available	annotation not available	0.969
ENSPCAP00000001583	ENSPCAP00000014913	ENSPCAP00000001583	ENSPCAP00000014913	annotation not available	annotation not available	0.999
ENSPCAP00000001583	ENSPCAP00000016128	ENSPCAP00000001583	ENSPCAP00000016128	annotation not available	annotation not available	0.984
ENSPCAP00000001583	HBQ1	ENSPCAP00000001583	ENSPCAP00000001594	annotation not available	Hemoglobin subunit theta 1.	0.845
ENSPCAP00000002309	ENSPCAP00000007041	ENSPCAP00000002309	ENSPCAP00000007041	annotation not available	annotation not available	0.460