STRINGSTRING
CLV75_3415 CLV75_3415 GCA_000192475_00151 GCA_000192475_00151 GCA_000192475_00152 GCA_000192475_00152 CLV75_3255 CLV75_3255 CLV75_3253 CLV75_3253 CLV75_3252 CLV75_3252 sucD sucD sucC sucC CLV75_4231 CLV75_4231 CLV75_4248 CLV75_4248 CLV75_3102 CLV75_3102 CLV75_3101 CLV75_3101 CLV75_3046 CLV75_3046 mdh mdh CLV75_3239 CLV75_3239 CLV75_3238 CLV75_3238 CLV75_3237 CLV75_3237 CLV75_3236 CLV75_3236 CLV75_3209 CLV75_3209 CLV75_2198 CLV75_2198 glcB glcB CLV75_1092 CLV75_1092 CLV75_1024 CLV75_1024 CLV75_0954 CLV75_0954 CLV75_0952 CLV75_0952 pdhA pdhA CLV75_0935 CLV75_0935 CLV75_2583 CLV75_2583 CLV75_2601 CLV75_2601 CLV75_2636 CLV75_2636 CLV75_3655 CLV75_3655 CLV75_0005 CLV75_0005 CLV75_0109 CLV75_0109 CLV75_0147 CLV75_0147 CLV75_0192 CLV75_0192 CLV75_0250 CLV75_0250 CLV75_0288 CLV75_0288 CLV75_0466 CLV75_0466 fumC fumC CLV75_0706 CLV75_0706 CLV75_3788 CLV75_3788 CLV75_4046 CLV75_4046 CLV75_4476 CLV75_4476 CLV75_4475 CLV75_4475 CLV75_4474 CLV75_4474 CLV75_4473 CLV75_4473 pckA pckA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLV75_3415Unannotated protein. (271 aa)
GCA_000192475_00151Unannotated protein. (52 aa)
GCA_000192475_00152Unannotated protein. (60 aa)
CLV75_3255Unannotated protein. (462 aa)
CLV75_3253Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (505 aa)
CLV75_3252Unannotated protein. (985 aa)
sucDUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (293 aa)
sucCUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (322 aa)
CLV75_4231Unannotated protein. (930 aa)
CLV75_4248Unannotated protein. (123 aa)
CLV75_3102Unannotated protein. (1510 aa)
CLV75_3101Unannotated protein. (477 aa)
CLV75_3046Unannotated protein. (757 aa)
mdhUnannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (320 aa)
CLV75_3239Unannotated protein. (127 aa)
CLV75_3238Unannotated protein. (127 aa)
CLV75_3237Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (602 aa)
CLV75_3236Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (259 aa)
CLV75_3209Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (349 aa)
CLV75_2198Unannotated protein; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1145 aa)
glcBUnannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (711 aa)
CLV75_1092Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (476 aa)
CLV75_1024Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (895 aa)
CLV75_0954Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (433 aa)
CLV75_0952Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (456 aa)
pdhAUnannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (329 aa)
CLV75_0935Unannotated protein. (464 aa)
CLV75_2583Unannotated protein. (486 aa)
CLV75_2601Unannotated protein; Belongs to the monomeric-type IDH family. (737 aa)
CLV75_2636Unannotated protein; Belongs to the glutamate synthase family. (526 aa)
CLV75_3655Unannotated protein. (730 aa)
CLV75_0005Unannotated protein. (757 aa)
CLV75_0109Unannotated protein. (85 aa)
CLV75_0147Unannotated protein. (258 aa)
CLV75_0192Unannotated protein. (861 aa)
CLV75_0250Unannotated protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (112 aa)
CLV75_0288Unannotated protein. (651 aa)
CLV75_0466Unannotated protein. (1139 aa)
fumCUnannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
CLV75_0706Unannotated protein; Belongs to the citrate synthase family. (431 aa)
CLV75_3788Unannotated protein. (675 aa)
CLV75_4046Unannotated protein. (1131 aa)
CLV75_4476Unannotated protein; Belongs to the glutamine synthetase family. (442 aa)
CLV75_4475Unannotated protein; Belongs to the glutamate synthase family. (445 aa)
CLV75_4474Unannotated protein. (227 aa)
CLV75_4473Unannotated protein. (309 aa)
pckAUnannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (532 aa)
Your Current Organism:
Ruegeria conchae
NCBI taxonomy Id: 981384
Other names: JCM 17315, KACC 15115, R. conchae, Ruegeria conchae Lee et al. 2012, Ruegeria sp. TW15, strain TW15
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