(12 nodes) Mixed, incl. UMP metabolic process, and Permease family network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DPYD	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (973 aa)
	UPB1	Beta-ureidopropionase 1. (393 aa)
	UMPS	Uridine monophosphate synthetase. (486 aa)
	DPYSL3	Dihydropyrimidinase like 3. (683 aa)
	LOC100525318	Uncharacterized protein. (616 aa)
	SLC23A1	Solute carrier family 23 member 1 isoform a. (605 aa)
	CRMP1	Collapsin response mediator protein 1. (784 aa)
	DPYS	Dihydropyrimidinase isoform X1. (519 aa)
	CYB5R4	Cytochrome b5 reductase 4. (546 aa)
	CYB5R3	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction. (300 aa)
	DHODH	Dihydroorotate dehydrogenase (quinone). (421 aa)
	GOLT1B	Uncharacterized protein. (138 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRMP1	CYB5R3	ENSSSCP00000022390	ENSSSCP00000060127	Collapsin response mediator protein 1.	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	0.583
CRMP1	CYB5R4	ENSSSCP00000022390	ENSSSCP00000045244	Collapsin response mediator protein 1.	Cytochrome b5 reductase 4.	0.590
CRMP1	DHODH	ENSSSCP00000022390	ENSSSCP00000066486	Collapsin response mediator protein 1.	Dihydroorotate dehydrogenase (quinone).	0.743
CRMP1	DPYD	ENSSSCP00000022390	ENSSSCP00000007333	Collapsin response mediator protein 1.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.739
CRMP1	DPYSL3	ENSSSCP00000022390	ENSSSCP00000015343	Collapsin response mediator protein 1.	Dihydropyrimidinase like 3.	0.792
CRMP1	GOLT1B	ENSSSCP00000022390	ENSSSCP00000067527	Collapsin response mediator protein 1.	Uncharacterized protein.	0.665
CRMP1	LOC100525318	ENSSSCP00000022390	ENSSSCP00000020987	Collapsin response mediator protein 1.	Uncharacterized protein.	0.584
CRMP1	SLC23A1	ENSSSCP00000022390	ENSSSCP00000021850	Collapsin response mediator protein 1.	Solute carrier family 23 member 1 isoform a.	0.584
CRMP1	UMPS	ENSSSCP00000022390	ENSSSCP00000012636	Collapsin response mediator protein 1.	Uridine monophosphate synthetase.	0.734
CRMP1	UPB1	ENSSSCP00000022390	ENSSSCP00000010733	Collapsin response mediator protein 1.	Beta-ureidopropionase 1.	0.465
CYB5R3	CRMP1	ENSSSCP00000060127	ENSSSCP00000022390	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Collapsin response mediator protein 1.	0.583
CYB5R3	DHODH	ENSSSCP00000060127	ENSSSCP00000066486	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Dihydroorotate dehydrogenase (quinone).	0.877
CYB5R3	DPYD	ENSSSCP00000060127	ENSSSCP00000007333	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.877
CYB5R3	DPYS	ENSSSCP00000060127	ENSSSCP00000043882	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Dihydropyrimidinase isoform X1.	0.583
CYB5R3	DPYSL3	ENSSSCP00000060127	ENSSSCP00000015343	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Dihydropyrimidinase like 3.	0.583
CYB5R3	GOLT1B	ENSSSCP00000060127	ENSSSCP00000067527	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Uncharacterized protein.	0.620
CYB5R3	LOC100525318	ENSSSCP00000060127	ENSSSCP00000020987	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Uncharacterized protein.	0.402
CYB5R3	SLC23A1	ENSSSCP00000060127	ENSSSCP00000021850	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Solute carrier family 23 member 1 isoform a.	0.402
CYB5R3	UMPS	ENSSSCP00000060127	ENSSSCP00000012636	NADH-cytochrome b5 reductase 3; Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.	Uridine monophosphate synthetase.	0.872
CYB5R4	CRMP1	ENSSSCP00000045244	ENSSSCP00000022390	Cytochrome b5 reductase 4.	Collapsin response mediator protein 1.	0.590