9 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPS6	Uncharacterized protein. (276 aa)
	MRPL17	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (169 aa)
	MRPL33	Mitochondrial ribosomal protein L33. (65 aa)
	MRPL36	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (100 aa)
	MRPL12	Mitochondrial ribosomal protein L12. (198 aa)
	A0A287BAP6_PIG	Uncharacterized protein. (312 aa)
	MRPL19	Mitochondrial ribosomal protein L19. (359 aa)
	MRPL27	Mitochondrial ribosomal protein L27. (159 aa)
	MRPS16	28S ribosomal protein S16, mitochondrial. (135 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287BAP6_PIG	MRPL12	ENSSSCP00000053575	ENSSSCP00000046596	Uncharacterized protein.	Mitochondrial ribosomal protein L12.	0.999
A0A287BAP6_PIG	MRPL17	ENSSSCP00000053575	ENSSSCP00000027865	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
A0A287BAP6_PIG	MRPL19	ENSSSCP00000053575	ENSSSCP00000064268	Uncharacterized protein.	Mitochondrial ribosomal protein L19.	0.999
A0A287BAP6_PIG	MRPL27	ENSSSCP00000053575	ENSSSCP00000065958	Uncharacterized protein.	Mitochondrial ribosomal protein L27.	0.999
A0A287BAP6_PIG	MRPL33	ENSSSCP00000053575	ENSSSCP00000034999	Uncharacterized protein.	Mitochondrial ribosomal protein L33.	0.999
A0A287BAP6_PIG	MRPL36	ENSSSCP00000053575	ENSSSCP00000039682	Uncharacterized protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
A0A287BAP6_PIG	MRPS16	ENSSSCP00000053575	ENSSSCP00000073451	Uncharacterized protein.	28S ribosomal protein S16, mitochondrial.	0.999
A0A287BAP6_PIG	MRPS6	ENSSSCP00000053575	ENSSSCP00000022487	Uncharacterized protein.	Uncharacterized protein.	0.999
MRPL12	A0A287BAP6_PIG	ENSSSCP00000046596	ENSSSCP00000053575	Mitochondrial ribosomal protein L12.	Uncharacterized protein.	0.999
MRPL12	MRPL17	ENSSSCP00000046596	ENSSSCP00000027865	Mitochondrial ribosomal protein L12.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
MRPL12	MRPL19	ENSSSCP00000046596	ENSSSCP00000064268	Mitochondrial ribosomal protein L12.	Mitochondrial ribosomal protein L19.	0.999
MRPL12	MRPL27	ENSSSCP00000046596	ENSSSCP00000065958	Mitochondrial ribosomal protein L12.	Mitochondrial ribosomal protein L27.	0.999
MRPL12	MRPL33	ENSSSCP00000046596	ENSSSCP00000034999	Mitochondrial ribosomal protein L12.	Mitochondrial ribosomal protein L33.	0.999
MRPL12	MRPL36	ENSSSCP00000046596	ENSSSCP00000039682	Mitochondrial ribosomal protein L12.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
MRPL12	MRPS16	ENSSSCP00000046596	ENSSSCP00000073451	Mitochondrial ribosomal protein L12.	28S ribosomal protein S16, mitochondrial.	0.999
MRPL12	MRPS6	ENSSSCP00000046596	ENSSSCP00000022487	Mitochondrial ribosomal protein L12.	Uncharacterized protein.	0.999
MRPL17	A0A287BAP6_PIG	ENSSSCP00000027865	ENSSSCP00000053575	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Uncharacterized protein.	0.999
MRPL17	MRPL12	ENSSSCP00000027865	ENSSSCP00000046596	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L12.	0.999
MRPL17	MRPL19	ENSSSCP00000027865	ENSSSCP00000064268	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L19.	0.999
MRPL17	MRPL27	ENSSSCP00000027865	ENSSSCP00000065958	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L27.	0.999