(5 nodes) Mixed, incl. Protein THEMIS, and Alpha-N-methyltransferase NTM1 network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ECEL1	Endothelin-converting enzyme-like 1 isoform 1. (775 aa)
	CHRND	Cholinergic receptor nicotinic delta subunit. (502 aa)
	THEMIS2	Thymocyte selection associated family member 2. (702 aa)
	ARL4C	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (192 aa)
	METTL11B	Methyltransferase like 11B. (301 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL4C	METTL11B	ENSSSCP00000034105	ENSSSCP00000050980	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Methyltransferase like 11B.	0.762
ARL4C	THEMIS2	ENSSSCP00000034105	ENSSSCP00000023939	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Thymocyte selection associated family member 2.	0.400
CHRND	ECEL1	ENSSSCP00000017255	ENSSSCP00000017252	Cholinergic receptor nicotinic delta subunit.	Endothelin-converting enzyme-like 1 isoform 1.	0.850
CHRND	METTL11B	ENSSSCP00000017255	ENSSSCP00000050980	Cholinergic receptor nicotinic delta subunit.	Methyltransferase like 11B.	0.445
CHRND	THEMIS2	ENSSSCP00000017255	ENSSSCP00000023939	Cholinergic receptor nicotinic delta subunit.	Thymocyte selection associated family member 2.	0.684
ECEL1	CHRND	ENSSSCP00000017252	ENSSSCP00000017255	Endothelin-converting enzyme-like 1 isoform 1.	Cholinergic receptor nicotinic delta subunit.	0.850
ECEL1	METTL11B	ENSSSCP00000017252	ENSSSCP00000050980	Endothelin-converting enzyme-like 1 isoform 1.	Methyltransferase like 11B.	0.508
ECEL1	THEMIS2	ENSSSCP00000017252	ENSSSCP00000023939	Endothelin-converting enzyme-like 1 isoform 1.	Thymocyte selection associated family member 2.	0.762
METTL11B	ARL4C	ENSSSCP00000050980	ENSSSCP00000034105	Methyltransferase like 11B.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.762
METTL11B	CHRND	ENSSSCP00000050980	ENSSSCP00000017255	Methyltransferase like 11B.	Cholinergic receptor nicotinic delta subunit.	0.445
METTL11B	ECEL1	ENSSSCP00000050980	ENSSSCP00000017252	Methyltransferase like 11B.	Endothelin-converting enzyme-like 1 isoform 1.	0.508
METTL11B	THEMIS2	ENSSSCP00000050980	ENSSSCP00000023939	Methyltransferase like 11B.	Thymocyte selection associated family member 2.	0.510
THEMIS2	ARL4C	ENSSSCP00000023939	ENSSSCP00000034105	Thymocyte selection associated family member 2.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.400
THEMIS2	CHRND	ENSSSCP00000023939	ENSSSCP00000017255	Thymocyte selection associated family member 2.	Cholinergic receptor nicotinic delta subunit.	0.684
THEMIS2	ECEL1	ENSSSCP00000023939	ENSSSCP00000017252	Thymocyte selection associated family member 2.	Endothelin-converting enzyme-like 1 isoform 1.	0.762
THEMIS2	METTL11B	ENSSSCP00000023939	ENSSSCP00000050980	Thymocyte selection associated family member 2.	Methyltransferase like 11B.	0.510