STRINGSTRING
SNU13 SNU13 PMEL PMEL UTP20 UTP20 IMP3 IMP3 NOB1 NOB1 F1SUY3_PIG F1SUY3_PIG UTP11 UTP11 MPHOSPH10 MPHOSPH10 RCL1 RCL1 DCAF13 DCAF13 WDR3 WDR3 DNTTIP2 DNTTIP2 NOP56 NOP56 NCOA6 NCOA6 NOP14 NOP14 NOC4L NOC4L HEATR1 HEATR1 PDCD11 PDCD11 NOL6 NOL6 UTP14A UTP14A NAT10 NAT10 UTP15 UTP15 IMP4 IMP4 WDR75 WDR75 FBLL1 FBLL1 UTP18 UTP18 AATF AATF FBL FBL NOP58 NOP58 UTP3 UTP3 BYSL BYSL WDR43 WDR43 BMS1 BMS1 EMG1 EMG1 RRP9 RRP9 A0A286ZLE8_PIG A0A286ZLE8_PIG NOL10 NOL10 WDR36 WDR36 DIMT1 DIMT1 UTP6 UTP6 A0A287AJR4_PIG A0A287AJR4_PIG FCF1 FCF1 GCC1 GCC1 NGDN NGDN A0A287B0N5_PIG A0A287B0N5_PIG PNO1 PNO1 RIOK2 RIOK2 TSR1 TSR1 TBL3 TBL3 KRR1 KRR1 LTV1 LTV1 WDR46 WDR46 UTP4 UTP4 RRP7A RRP7A PWP2 PWP2 BUD23 BUD23 MCC MCC RTCA RTCA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
PMELMelanocyte protein PMEL isoform 3 preproprotein. (637 aa)
UTP20UTP20 small subunit processome component. (2781 aa)
IMP3S4 RNA-binding domain-containing protein. (184 aa)
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (413 aa)
F1SUY3_PIGUncharacterized protein. (308 aa)
UTP11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (680 aa)
RCL1RNA terminal phosphate cyclase like 1. (450 aa)
DCAF13DDB1 and CUL4 associated factor 13. (444 aa)
WDR3WD repeat domain 3. (943 aa)
DNTTIP2Fcf2 domain-containing protein. (771 aa)
NOP56NOP56 ribonucleoprotein. (596 aa)
NCOA6Nuclear receptor coactivator 6. (2061 aa)
NOP14NOP14 nucleolar protein. (852 aa)
NOC4LNucleolar complex associated 4 homolog. (543 aa)
HEATR1HEAT repeat containing 1. (2141 aa)
PDCD11Programmed cell death 11. (1875 aa)
NOL6Nucleolar protein 6. (1145 aa)
UTP14AUncharacterized protein. (773 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
UTP15Uncharacterized protein. (518 aa)
IMP4U3 small nucleolar ribonucleoprotein IMP4 isoform a. (291 aa)
WDR75WD repeat-containing protein 75 isoform 1. (831 aa)
FBLL1rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (332 aa)
UTP18U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
AATFApoptosis antagonizing transcription factor. (569 aa)
FBLFibrillarin. (321 aa)
NOP58NOP58 ribonucleoprotein. (546 aa)
UTP3Sas10 domain-containing protein. (474 aa)
BYSLUncharacterized protein. (435 aa)
WDR43WD repeat-containing protein 43. (681 aa)
BMS1BMS1 ribosome biogenesis factor. (1284 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform 1. (244 aa)
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
A0A286ZLE8_PIGRibosomal_L7Ae domain-containing protein. (74 aa)
NOL10Nucleolar protein 10 isoform 1. (688 aa)
WDR36WD repeat domain 36. (895 aa)
DIMT1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (313 aa)
UTP6UTP6 small subunit processome component. (598 aa)
A0A287AJR4_PIGRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
FCF1FCF1 rRNA-processing protein. (198 aa)
GCC1GRIP and coiled-coil domain-containing protein 1. (775 aa)
NGDNUncharacterized protein. (328 aa)
A0A287B0N5_PIGRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (123 aa)
PNO1RNA-binding protein PNO1 isoform 1. (252 aa)
RIOK2RIO domain-containing protein. (190 aa)
TSR1TSR1 ribosome maturation factor. (763 aa)
TBL3Transducin beta like 3. (889 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (375 aa)
LTV1LTV1 ribosome biogenesis factor. (475 aa)
WDR46WD repeat-containing protein 46 isoform 1. (656 aa)
UTP4U3 small nucleolar RNA-associated protein 4 homolog isoform 1. (686 aa)
RRP7ARibosomal RNA processing 7 homolog A. (412 aa)
PWP2Uncharacterized protein. (1096 aa)
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (372 aa)
MCCMCC regulator of WNT signaling pathway. (982 aa)
RTCAUncharacterized protein. (379 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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