25 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UTP20	UTP20 small subunit processome component. (2781 aa)
	MPHOSPH10	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (680 aa)
	RCL1	RNA terminal phosphate cyclase like 1. (450 aa)
	DCAF13	DDB1 and CUL4 associated factor 13. (444 aa)
	WDR3	WD repeat domain 3. (943 aa)
	NOP14	NOP14 nucleolar protein. (852 aa)
	NOC4L	Nucleolar complex associated 4 homolog. (543 aa)
	HEATR1	HEAT repeat containing 1. (2141 aa)
	PDCD11	Programmed cell death 11. (1875 aa)
	NOL6	Nucleolar protein 6. (1145 aa)
	UTP14A	Uncharacterized protein. (773 aa)
	UTP15	Uncharacterized protein. (518 aa)
	WDR75	WD repeat-containing protein 75 isoform 1. (831 aa)
	UTP18	U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
	UTP3	Sas10 domain-containing protein. (474 aa)
	WDR43	WD repeat-containing protein 43. (681 aa)
	BMS1	BMS1 ribosome biogenesis factor. (1284 aa)
	RRP9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
	NOL10	Nucleolar protein 10 isoform 1. (688 aa)
	WDR36	WD repeat domain 36. (895 aa)
	UTP6	UTP6 small subunit processome component. (598 aa)
	TBL3	Transducin beta like 3. (889 aa)
	WDR46	WD repeat-containing protein 46 isoform 1. (656 aa)
	UTP4	U3 small nucleolar RNA-associated protein 4 homolog isoform 1. (686 aa)
	PWP2	Uncharacterized protein. (1096 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMS1	DCAF13	ENSSSCP00000025609	ENSSSCP00000006459	BMS1 ribosome biogenesis factor.	DDB1 and CUL4 associated factor 13.	0.992
BMS1	HEATR1	ENSSSCP00000025609	ENSSSCP00000010819	BMS1 ribosome biogenesis factor.	HEAT repeat containing 1.	0.997
BMS1	MPHOSPH10	ENSSSCP00000025609	ENSSSCP00000005216	BMS1 ribosome biogenesis factor.	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.998
BMS1	NOC4L	ENSSSCP00000025609	ENSSSCP00000010401	BMS1 ribosome biogenesis factor.	Nucleolar complex associated 4 homolog.	0.991
BMS1	NOL10	ENSSSCP00000025609	ENSSSCP00000033617	BMS1 ribosome biogenesis factor.	Nucleolar protein 10 isoform 1.	0.997
BMS1	NOL6	ENSSSCP00000025609	ENSSSCP00000011723	BMS1 ribosome biogenesis factor.	Nucleolar protein 6.	0.996
BMS1	NOP14	ENSSSCP00000025609	ENSSSCP00000009267	BMS1 ribosome biogenesis factor.	NOP14 nucleolar protein.	0.998
BMS1	PDCD11	ENSSSCP00000025609	ENSSSCP00000011292	BMS1 ribosome biogenesis factor.	Programmed cell death 11.	0.997
BMS1	PWP2	ENSSSCP00000025609	ENSSSCP00000064459	BMS1 ribosome biogenesis factor.	Uncharacterized protein.	0.997
BMS1	RCL1	ENSSSCP00000025609	ENSSSCP00000005608	BMS1 ribosome biogenesis factor.	RNA terminal phosphate cyclase like 1.	0.999
BMS1	RRP9	ENSSSCP00000025609	ENSSSCP00000026458	BMS1 ribosome biogenesis factor.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.986
BMS1	TBL3	ENSSSCP00000025609	ENSSSCP00000053073	BMS1 ribosome biogenesis factor.	Transducin beta like 3.	0.994
BMS1	UTP14A	ENSSSCP00000025609	ENSSSCP00000013453	BMS1 ribosome biogenesis factor.	Uncharacterized protein.	0.996
BMS1	UTP15	ENSSSCP00000025609	ENSSSCP00000014960	BMS1 ribosome biogenesis factor.	Uncharacterized protein.	0.992
BMS1	UTP18	ENSSSCP00000025609	ENSSSCP00000018647	BMS1 ribosome biogenesis factor.	U3 small nucleolar RNA-associated protein 18 homolog.	0.994
BMS1	UTP20	ENSSSCP00000025609	ENSSSCP00000000929	BMS1 ribosome biogenesis factor.	UTP20 small subunit processome component.	0.998
BMS1	UTP3	ENSSSCP00000025609	ENSSSCP00000023124	BMS1 ribosome biogenesis factor.	Sas10 domain-containing protein.	0.996
BMS1	UTP4	ENSSSCP00000025609	ENSSSCP00000063268	BMS1 ribosome biogenesis factor.	U3 small nucleolar RNA-associated protein 4 homolog isoform 1.	0.997
BMS1	UTP6	ENSSSCP00000025609	ENSSSCP00000041885	BMS1 ribosome biogenesis factor.	UTP6 small subunit processome component.	0.996
BMS1	WDR3	ENSSSCP00000025609	ENSSSCP00000007174	BMS1 ribosome biogenesis factor.	WD repeat domain 3.	0.998