11 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WDR3	WD repeat domain 3. (943 aa)
	UTP15	Uncharacterized protein. (518 aa)
	WDR75	WD repeat-containing protein 75 isoform 1. (831 aa)
	UTP18	U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
	WDR43	WD repeat-containing protein 43. (681 aa)
	RRP9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
	WDR36	WD repeat domain 36. (895 aa)
	UTP6	UTP6 small subunit processome component. (598 aa)
	TBL3	Transducin beta like 3. (889 aa)
	UTP4	U3 small nucleolar RNA-associated protein 4 homolog isoform 1. (686 aa)
	PWP2	Uncharacterized protein. (1096 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PWP2	RRP9	ENSSSCP00000064459	ENSSSCP00000026458	Uncharacterized protein.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.998
PWP2	TBL3	ENSSSCP00000064459	ENSSSCP00000053073	Uncharacterized protein.	Transducin beta like 3.	0.999
PWP2	UTP15	ENSSSCP00000064459	ENSSSCP00000014960	Uncharacterized protein.	Uncharacterized protein.	0.996
PWP2	UTP18	ENSSSCP00000064459	ENSSSCP00000018647	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
PWP2	UTP4	ENSSSCP00000064459	ENSSSCP00000063268	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 4 homolog isoform 1.	0.999
PWP2	UTP6	ENSSSCP00000064459	ENSSSCP00000041885	Uncharacterized protein.	UTP6 small subunit processome component.	0.999
PWP2	WDR3	ENSSSCP00000064459	ENSSSCP00000007174	Uncharacterized protein.	WD repeat domain 3.	0.999
PWP2	WDR36	ENSSSCP00000064459	ENSSSCP00000034133	Uncharacterized protein.	WD repeat domain 36.	0.999
PWP2	WDR43	ENSSSCP00000064459	ENSSSCP00000023402	Uncharacterized protein.	WD repeat-containing protein 43.	0.998
PWP2	WDR75	ENSSSCP00000064459	ENSSSCP00000016991	Uncharacterized protein.	WD repeat-containing protein 75 isoform 1.	0.997
RRP9	PWP2	ENSSSCP00000026458	ENSSSCP00000064459	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	Uncharacterized protein.	0.998
RRP9	TBL3	ENSSSCP00000026458	ENSSSCP00000053073	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	Transducin beta like 3.	0.995
RRP9	UTP15	ENSSSCP00000026458	ENSSSCP00000014960	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	Uncharacterized protein.	0.995
RRP9	UTP18	ENSSSCP00000026458	ENSSSCP00000018647	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	U3 small nucleolar RNA-associated protein 18 homolog.	0.995
RRP9	UTP4	ENSSSCP00000026458	ENSSSCP00000063268	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	U3 small nucleolar RNA-associated protein 4 homolog isoform 1.	0.997
RRP9	UTP6	ENSSSCP00000026458	ENSSSCP00000041885	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	UTP6 small subunit processome component.	0.996
RRP9	WDR3	ENSSSCP00000026458	ENSSSCP00000007174	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	WD repeat domain 3.	0.994
RRP9	WDR36	ENSSSCP00000026458	ENSSSCP00000034133	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	WD repeat domain 36.	0.996
RRP9	WDR43	ENSSSCP00000026458	ENSSSCP00000023402	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	WD repeat-containing protein 43.	0.995
RRP9	WDR75	ENSSSCP00000026458	ENSSSCP00000016991	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	WD repeat-containing protein 75 isoform 1.	0.993