6 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WDR3	WD repeat domain 3. (943 aa)
	UTP18	U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
	WDR36	WD repeat domain 36. (895 aa)
	UTP6	UTP6 small subunit processome component. (598 aa)
	TBL3	Transducin beta like 3. (889 aa)
	PWP2	Uncharacterized protein. (1096 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PWP2	TBL3	ENSSSCP00000064459	ENSSSCP00000053073	Uncharacterized protein.	Transducin beta like 3.	0.999
PWP2	UTP18	ENSSSCP00000064459	ENSSSCP00000018647	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
PWP2	UTP6	ENSSSCP00000064459	ENSSSCP00000041885	Uncharacterized protein.	UTP6 small subunit processome component.	0.999
PWP2	WDR3	ENSSSCP00000064459	ENSSSCP00000007174	Uncharacterized protein.	WD repeat domain 3.	0.999
PWP2	WDR36	ENSSSCP00000064459	ENSSSCP00000034133	Uncharacterized protein.	WD repeat domain 36.	0.999
TBL3	PWP2	ENSSSCP00000053073	ENSSSCP00000064459	Transducin beta like 3.	Uncharacterized protein.	0.999
TBL3	UTP18	ENSSSCP00000053073	ENSSSCP00000018647	Transducin beta like 3.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
TBL3	UTP6	ENSSSCP00000053073	ENSSSCP00000041885	Transducin beta like 3.	UTP6 small subunit processome component.	0.998
TBL3	WDR3	ENSSSCP00000053073	ENSSSCP00000007174	Transducin beta like 3.	WD repeat domain 3.	0.999
TBL3	WDR36	ENSSSCP00000053073	ENSSSCP00000034133	Transducin beta like 3.	WD repeat domain 36.	0.999
UTP18	PWP2	ENSSSCP00000018647	ENSSSCP00000064459	U3 small nucleolar RNA-associated protein 18 homolog.	Uncharacterized protein.	0.999
UTP18	TBL3	ENSSSCP00000018647	ENSSSCP00000053073	U3 small nucleolar RNA-associated protein 18 homolog.	Transducin beta like 3.	0.999
UTP18	UTP6	ENSSSCP00000018647	ENSSSCP00000041885	U3 small nucleolar RNA-associated protein 18 homolog.	UTP6 small subunit processome component.	0.999
UTP18	WDR3	ENSSSCP00000018647	ENSSSCP00000007174	U3 small nucleolar RNA-associated protein 18 homolog.	WD repeat domain 3.	0.999
UTP18	WDR36	ENSSSCP00000018647	ENSSSCP00000034133	U3 small nucleolar RNA-associated protein 18 homolog.	WD repeat domain 36.	0.999
UTP6	PWP2	ENSSSCP00000041885	ENSSSCP00000064459	UTP6 small subunit processome component.	Uncharacterized protein.	0.999
UTP6	TBL3	ENSSSCP00000041885	ENSSSCP00000053073	UTP6 small subunit processome component.	Transducin beta like 3.	0.998
UTP6	UTP18	ENSSSCP00000041885	ENSSSCP00000018647	UTP6 small subunit processome component.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
UTP6	WDR3	ENSSSCP00000041885	ENSSSCP00000007174	UTP6 small subunit processome component.	WD repeat domain 3.	0.999
UTP6	WDR36	ENSSSCP00000041885	ENSSSCP00000034133	UTP6 small subunit processome component.	WD repeat domain 36.	0.999