STRINGSTRING
TMEM215 TMEM215 VSX1 VSX1 CDH18 CDH18 PRDM8 PRDM8 SCGN SCGN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TMEM215Transmembrane protein 215. (235 aa)
VSX1Visual system homeobox 1. (364 aa)
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (797 aa)
PRDM8PR domain zinc finger protein 8 isoform X1. (690 aa)
SCGNSecretagogin. (278 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.