STRINGSTRING
COL27A1 COL27A1 COL5A1 COL5A1 COL5A3 COL5A3 COL23A1 COL23A1 COL6A2 COL6A2 COL6A3 COL6A3 COL18A1 COL18A1 COL16A1 COL16A1 SERPINH1 SERPINH1 COL2A1 COL2A1 COL8A2 COL8A2 COL5A2 COL5A2 COL6A5 COL6A5 COL11A2 COL11A2 COL14A1 COL14A1 COL6A1 COL6A1 COL8A1 COL8A1 COL11A1 COL11A1 COL21A1 COL21A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL27A1Collagen type XXVII alpha 1 chain. (1843 aa)
COL5A1Fibrillar collagen NC1 domain-containing protein. (1918 aa)
COL5A3Collagen type V alpha 3 chain. (1747 aa)
COL23A1Collagen type XXIII alpha 1 chain. (540 aa)
COL6A2Collagen type VI alpha 2 chain. (943 aa)
COL6A3Collagen type VI alpha 3 chain. (2911 aa)
COL18A1Collagen type XVIII alpha 1 chain. (1755 aa)
COL16A1Collagen alpha-1(XVI) chain isoform X2. (1624 aa)
SERPINH1SERPIN domain-containing protein; Belongs to the serpin family. (418 aa)
COL2A1Collagen type II alpha 1 chain. (1486 aa)
COL8A2Collagen type VIII alpha 2 chain. (707 aa)
COL5A2Collagen alpha-2(V) chain preproprotein. (1499 aa)
COL6A5Collagen type VI alpha 5 chain. (2337 aa)
COL11A2Collagen type XI alpha 2 chain. (1796 aa)
COL14A1Collagen alpha-1(XIV) chain isoform X1. (1796 aa)
COL6A1Collagen type VI alpha 1 chain. (1028 aa)
COL8A1Collagen type VIII alpha 1 chain. (759 aa)
COL11A1Collagen type XI alpha 1 chain. (1816 aa)
COL21A1Collagen type XXI alpha 1 chain. (957 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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