5 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NOTCH4	Uncharacterized protein. (1993 aa)
	NOTCH3	Notch receptor 3. (2321 aa)
	DLL1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (729 aa)
	DLL4	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (685 aa)
	DLL3	Delta like canonical Notch ligand 3. (619 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLL1	DLL3	ENSSSCP00000025758	ENSSSCP00000066353	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta like canonical Notch ligand 3.	0.917
DLL1	DLL4	ENSSSCP00000025758	ENSSSCP00000055160	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.914
DLL1	NOTCH3	ENSSSCP00000025758	ENSSSCP00000021312	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 3.	0.985
DLL1	NOTCH4	ENSSSCP00000025758	ENSSSCP00000001551	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.985
DLL3	DLL1	ENSSSCP00000066353	ENSSSCP00000025758	Delta like canonical Notch ligand 3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.917
DLL3	DLL4	ENSSSCP00000066353	ENSSSCP00000055160	Delta like canonical Notch ligand 3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.923
DLL3	NOTCH3	ENSSSCP00000066353	ENSSSCP00000021312	Delta like canonical Notch ligand 3.	Notch receptor 3.	0.982
DLL3	NOTCH4	ENSSSCP00000066353	ENSSSCP00000001551	Delta like canonical Notch ligand 3.	Uncharacterized protein.	0.988
DLL4	DLL1	ENSSSCP00000055160	ENSSSCP00000025758	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.914
DLL4	DLL3	ENSSSCP00000055160	ENSSSCP00000066353	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta like canonical Notch ligand 3.	0.923
DLL4	NOTCH3	ENSSSCP00000055160	ENSSSCP00000021312	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 3.	0.987
DLL4	NOTCH4	ENSSSCP00000055160	ENSSSCP00000001551	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.993
NOTCH3	DLL1	ENSSSCP00000021312	ENSSSCP00000025758	Notch receptor 3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.985
NOTCH3	DLL3	ENSSSCP00000021312	ENSSSCP00000066353	Notch receptor 3.	Delta like canonical Notch ligand 3.	0.982
NOTCH3	DLL4	ENSSSCP00000021312	ENSSSCP00000055160	Notch receptor 3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.987
NOTCH3	NOTCH4	ENSSSCP00000021312	ENSSSCP00000001551	Notch receptor 3.	Uncharacterized protein.	0.651
NOTCH4	DLL1	ENSSSCP00000001551	ENSSSCP00000025758	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.985
NOTCH4	DLL3	ENSSSCP00000001551	ENSSSCP00000066353	Uncharacterized protein.	Delta like canonical Notch ligand 3.	0.988
NOTCH4	DLL4	ENSSSCP00000001551	ENSSSCP00000055160	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.993
NOTCH4	NOTCH3	ENSSSCP00000001551	ENSSSCP00000021312	Uncharacterized protein.	Notch receptor 3.	0.651