STRINGSTRING
LHFPL5 LHFPL5 CIB2 CIB2 TMC1 TMC1 TMC2 TMC2 CDH23 CDH23 PDZD7 PDZD7 USH1C USH1C MYO7A MYO7A USH1G USH1G ADGRV1 ADGRV1 CLRN1 CLRN1 USH2A USH2A PCDH15 PCDH15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LHFPL5LHFPL tetraspan subfamily member 5. (219 aa)
CIB2Calcium and integrin binding family member 2. (186 aa)
TMC1Transmembrane channel-like protein. (759 aa)
TMC2Transmembrane channel-like protein. (904 aa)
CDH23Cadherin related 23. (3354 aa)
PDZD7Uncharacterized protein. (566 aa)
USH1CUSH1 protein network component harmonin. (858 aa)
MYO7AUnconventional myosin-VIIa; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. In the retina, plays an important role in the renewal of the outer photoreceptor disks. Plays an important role in the distribution and migration of retinal pigment epithelial (RPE) melanosomes and phagosomes, and in the regulation of opsin transport in retinal photoreceptors. In the inner ear, plays an important role in differenti [...] (2213 aa)
USH1GUSH1 protein network component sans. (461 aa)
ADGRV1Adhesion G protein-coupled receptor V1. (6313 aa)
CLRN1Clarin 1. (232 aa)
USH2AUncharacterized protein. (1544 aa)
PCDH15Uncharacterized protein. (984 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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