12 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KRT85	Keratin 85; Belongs to the intermediate filament family. (506 aa)
	KRT84	Keratin 84; Belongs to the intermediate filament family. (593 aa)
	PLA2G2C	PA2c domain-containing protein. (174 aa)
	TUSC1	Tumor suppressor candidate 1. (211 aa)
	IFN-OMEGA-3	Interferon-omega-4. (190 aa)
	IFN-DELTA-1	Short type I interferon. (170 aa)
	RFX8	RFX family member 8, lacking RFX DNA binding domain. (579 aa)
	PHEROC	Uncharacterized protein. (93 aa)
	SCGB1D1	Secretoglobin family 1D member 2. (111 aa)
	IFN-DELTA-6	Uncharacterized protein. (184 aa)
	IFN-OMEGA-2	Uncharacterized protein. (176 aa)
	ATP10B	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1464 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP10B	KRT84	ENSSSCP00000037987	ENSSSCP00000000256	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Keratin 84; Belongs to the intermediate filament family.	0.614
ATP10B	KRT85	ENSSSCP00000037987	ENSSSCP00000000255	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Keratin 85; Belongs to the intermediate filament family.	0.552
ATP10B	PLA2G2C	ENSSSCP00000037987	ENSSSCP00000003799	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	PA2c domain-containing protein.	0.555
IFN-DELTA-1	PHEROC	ENSSSCP00000005539	ENSSSCP00000013897	Short type I interferon.	Uncharacterized protein.	0.410
IFN-DELTA-1	SCGB1D1	ENSSSCP00000005539	ENSSSCP00000013898	Short type I interferon.	Secretoglobin family 1D member 2.	0.546
IFN-DELTA-6	PHEROC	ENSSSCP00000025668	ENSSSCP00000013897	Uncharacterized protein.	Uncharacterized protein.	0.532
IFN-DELTA-6	SCGB1D1	ENSSSCP00000025668	ENSSSCP00000013898	Uncharacterized protein.	Secretoglobin family 1D member 2.	0.611
IFN-OMEGA-2	PHEROC	ENSSSCP00000030166	ENSSSCP00000013897	Uncharacterized protein.	Uncharacterized protein.	0.546
IFN-OMEGA-2	SCGB1D1	ENSSSCP00000030166	ENSSSCP00000013898	Uncharacterized protein.	Secretoglobin family 1D member 2.	0.613
IFN-OMEGA-3	PHEROC	ENSSSCP00000005532	ENSSSCP00000013897	Interferon-omega-4.	Uncharacterized protein.	0.505
IFN-OMEGA-3	SCGB1D1	ENSSSCP00000005532	ENSSSCP00000013898	Interferon-omega-4.	Secretoglobin family 1D member 2.	0.608
KRT84	ATP10B	ENSSSCP00000000256	ENSSSCP00000037987	Keratin 84; Belongs to the intermediate filament family.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.614
KRT84	KRT85	ENSSSCP00000000256	ENSSSCP00000000255	Keratin 84; Belongs to the intermediate filament family.	Keratin 85; Belongs to the intermediate filament family.	0.437
KRT85	ATP10B	ENSSSCP00000000255	ENSSSCP00000037987	Keratin 85; Belongs to the intermediate filament family.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.552
KRT85	KRT84	ENSSSCP00000000255	ENSSSCP00000000256	Keratin 85; Belongs to the intermediate filament family.	Keratin 84; Belongs to the intermediate filament family.	0.437
KRT85	RFX8	ENSSSCP00000000255	ENSSSCP00000008716	Keratin 85; Belongs to the intermediate filament family.	RFX family member 8, lacking RFX DNA binding domain.	0.849
KRT85	TUSC1	ENSSSCP00000000255	ENSSSCP00000005512	Keratin 85; Belongs to the intermediate filament family.	Tumor suppressor candidate 1.	0.765
PHEROC	IFN-DELTA-1	ENSSSCP00000013897	ENSSSCP00000005539	Uncharacterized protein.	Short type I interferon.	0.410
PHEROC	IFN-DELTA-6	ENSSSCP00000013897	ENSSSCP00000025668	Uncharacterized protein.	Uncharacterized protein.	0.532
PHEROC	IFN-OMEGA-2	ENSSSCP00000013897	ENSSSCP00000030166	Uncharacterized protein.	Uncharacterized protein.	0.546