STRINGSTRING
SF3B4 SF3B4 SF3B6 SF3B6 SF3B2 SF3B2 SF3B1 SF3B1 PHF5A PHF5A SF3B3 SF3B3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3B4Splicing factor 3b subunit 4. (424 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
SF3B1Splicing factor 3B subunit 1 isoform 1. (1304 aa)
PHF5APHD finger protein 5A. (139 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.