(13 nodes) Mixed, incl. SERTA motif, and Torsin network (Sus scrofa)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C6orf52	Chromosome 6 open reading frame 52. (158 aa)
	LONRF1	LON peptidase N-terminal domain and RING finger protein 1 isoform 1. (770 aa)
	C8orf48	Chromosome 8 open reading frame 48. (264 aa)
	CCDC84	Coiled-coil domain-containing protein 84. (327 aa)
	SERTAD1	SERTA domain-containing protein 1. (239 aa)
	B3GNTL1	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1. (341 aa)
	TOR1AIP2	Torsin 1A interacting protein 2. (531 aa)
	SERTAD3	SERTA domain containing 3. (197 aa)
	KIAA1671	Tankyrase_bdg_C domain-containing protein. (492 aa)
	ENTR1	Endosome associated trafficking regulator 1. (431 aa)
	TOR1A	Torsin. (333 aa)
	SIVA1	Apoptosis regulatory protein Siva; Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl- x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis. (199 aa)
	EMID1	EMI domain containing 1. (509 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNTL1	C6orf52	ENSSSCP00000022975	ENSSSCP00000001111	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1.	Chromosome 6 open reading frame 52.	0.515
C6orf52	B3GNTL1	ENSSSCP00000001111	ENSSSCP00000022975	Chromosome 6 open reading frame 52.	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1.	0.515
C6orf52	CCDC84	ENSSSCP00000001111	ENSSSCP00000016025	Chromosome 6 open reading frame 52.	Coiled-coil domain-containing protein 84.	0.897
C6orf52	TOR1A	ENSSSCP00000001111	ENSSSCP00000058063	Chromosome 6 open reading frame 52.	Torsin.	0.541
C6orf52	TOR1AIP2	ENSSSCP00000001111	ENSSSCP00000023296	Chromosome 6 open reading frame 52.	Torsin 1A interacting protein 2.	0.729
C8orf48	LONRF1	ENSSSCP00000007432	ENSSSCP00000007428	Chromosome 8 open reading frame 48.	LON peptidase N-terminal domain and RING finger protein 1 isoform 1.	0.605
CCDC84	C6orf52	ENSSSCP00000016025	ENSSSCP00000001111	Coiled-coil domain-containing protein 84.	Chromosome 6 open reading frame 52.	0.897
CCDC84	ENTR1	ENSSSCP00000016025	ENSSSCP00000050790	Coiled-coil domain-containing protein 84.	Endosome associated trafficking regulator 1.	0.664
CCDC84	TOR1A	ENSSSCP00000016025	ENSSSCP00000058063	Coiled-coil domain-containing protein 84.	Torsin.	0.841
CCDC84	TOR1AIP2	ENSSSCP00000016025	ENSSSCP00000023296	Coiled-coil domain-containing protein 84.	Torsin 1A interacting protein 2.	0.728
EMID1	SERTAD1	ENSSSCP00000067147	ENSSSCP00000019668	EMI domain containing 1.	SERTA domain-containing protein 1.	0.670
EMID1	SERTAD3	ENSSSCP00000067147	ENSSSCP00000033535	EMI domain containing 1.	SERTA domain containing 3.	0.725
EMID1	SIVA1	ENSSSCP00000067147	ENSSSCP00000059665	EMI domain containing 1.	Apoptosis regulatory protein Siva; Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl- x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis.	0.689
EMID1	TOR1AIP2	ENSSSCP00000067147	ENSSSCP00000023296	EMI domain containing 1.	Torsin 1A interacting protein 2.	0.670
ENTR1	CCDC84	ENSSSCP00000050790	ENSSSCP00000016025	Endosome associated trafficking regulator 1.	Coiled-coil domain-containing protein 84.	0.664
ENTR1	KIAA1671	ENSSSCP00000050790	ENSSSCP00000041646	Endosome associated trafficking regulator 1.	Tankyrase_bdg_C domain-containing protein.	0.512
ENTR1	TOR1A	ENSSSCP00000050790	ENSSSCP00000058063	Endosome associated trafficking regulator 1.	Torsin.	0.448
KIAA1671	ENTR1	ENSSSCP00000041646	ENSSSCP00000050790	Tankyrase_bdg_C domain-containing protein.	Endosome associated trafficking regulator 1.	0.512
LONRF1	C8orf48	ENSSSCP00000007428	ENSSSCP00000007432	LON peptidase N-terminal domain and RING finger protein 1 isoform 1.	Chromosome 8 open reading frame 48.	0.605
LONRF1	SERTAD1	ENSSSCP00000007428	ENSSSCP00000019668	LON peptidase N-terminal domain and RING finger protein 1 isoform 1.	SERTA domain-containing protein 1.	0.619