21 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WDR20	WD repeat domain 20. (612 aa)
	HELQ	Helicase, POLQ like. (1076 aa)
	USP12	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (370 aa)
	UBE2T	Ubiquitin-conjugating enzyme E2 T isoform 1; Belongs to the ubiquitin-conjugating enzyme family. (231 aa)
	FANCE	FA complementation group E. (538 aa)
	FANCM	FA complementation group M. (2067 aa)
	FAAP24	FA core complex associated protein 24. (215 aa)
	FANCA	FA complementation group A. (1484 aa)
	FANCB	FA complementation group B. (855 aa)
	FANCF	FA complementation group F. (376 aa)
	RAD51AP1	RAD51 associated protein 1. (345 aa)
	FAAP20	Uncharacterized protein. (194 aa)
	FAAP100	FA core complex associated protein 100. (859 aa)
	USP1	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (784 aa)
	FANCI	FA complementation group I. (1362 aa)
	POLN	DNA polymerase nu. (900 aa)
	FANCL	FA complementation group L. (378 aa)
	FANCG	FA complementation group G. (626 aa)
	FANCC	Uncharacterized protein. (124 aa)
	FANCD2	Fanconi anemia group D2 protein isoform b. (1459 aa)
	WDR48	WD repeat domain 48. (740 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAAP100	FAAP20	ENSSSCP00000036481	ENSSSCP00000034552	FA core complex associated protein 100.	Uncharacterized protein.	0.911
FAAP100	FAAP24	ENSSSCP00000036481	ENSSSCP00000023493	FA core complex associated protein 100.	FA core complex associated protein 24.	0.999
FAAP100	FANCA	ENSSSCP00000036481	ENSSSCP00000024541	FA core complex associated protein 100.	FA complementation group A.	0.999
FAAP100	FANCB	ENSSSCP00000036481	ENSSSCP00000028664	FA core complex associated protein 100.	FA complementation group B.	0.999
FAAP100	FANCC	ENSSSCP00000036481	ENSSSCP00000057452	FA core complex associated protein 100.	Uncharacterized protein.	0.999
FAAP100	FANCD2	ENSSSCP00000036481	ENSSSCP00000060344	FA core complex associated protein 100.	Fanconi anemia group D2 protein isoform b.	0.995
FAAP100	FANCE	ENSSSCP00000036481	ENSSSCP00000020351	FA core complex associated protein 100.	FA complementation group E.	0.988
FAAP100	FANCF	ENSSSCP00000036481	ENSSSCP00000031922	FA core complex associated protein 100.	FA complementation group F.	0.999
FAAP100	FANCG	ENSSSCP00000036481	ENSSSCP00000052519	FA core complex associated protein 100.	FA complementation group G.	0.999
FAAP100	FANCI	ENSSSCP00000036481	ENSSSCP00000041844	FA core complex associated protein 100.	FA complementation group I.	0.982
FAAP100	FANCL	ENSSSCP00000036481	ENSSSCP00000052056	FA core complex associated protein 100.	FA complementation group L.	0.999
FAAP100	FANCM	ENSSSCP00000036481	ENSSSCP00000021205	FA core complex associated protein 100.	FA complementation group M.	0.996
FAAP100	POLN	ENSSSCP00000036481	ENSSSCP00000047431	FA core complex associated protein 100.	DNA polymerase nu.	0.499
FAAP100	UBE2T	ENSSSCP00000036481	ENSSSCP00000011648	FA core complex associated protein 100.	Ubiquitin-conjugating enzyme E2 T isoform 1; Belongs to the ubiquitin-conjugating enzyme family.	0.990
FAAP100	USP1	ENSSSCP00000036481	ENSSSCP00000040369	FA core complex associated protein 100.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.669
FAAP100	WDR48	ENSSSCP00000036481	ENSSSCP00000068677	FA core complex associated protein 100.	WD repeat domain 48.	0.695
FAAP20	FAAP100	ENSSSCP00000034552	ENSSSCP00000036481	Uncharacterized protein.	FA core complex associated protein 100.	0.911
FAAP20	FAAP24	ENSSSCP00000034552	ENSSSCP00000023493	Uncharacterized protein.	FA core complex associated protein 24.	0.910
FAAP20	FANCA	ENSSSCP00000034552	ENSSSCP00000024541	Uncharacterized protein.	FA complementation group A.	0.910
FAAP20	FANCB	ENSSSCP00000034552	ENSSSCP00000028664	Uncharacterized protein.	FA complementation group B.	0.875