STRINGSTRING
RPS18 RPS18 RPS11 RPS11 RPS8 RPS8 RPS12 RPS12 RPL30 RPL30 RPS3A RPS3A RPL34 RPL34 RPL14 RPL14 RPS13 RPS13 RPS28 RPS28 RPS23 RPS23 RPS25 RPS25 RPL19 RPL19 RPL18 RPL18 RPL26 RPL26 RPS17 RPS17 I3L8W3_PIG I3L8W3_PIG RPS21 RPS21 LOC100519675 LOC100519675 RPS9 RPS9 RACK1 RACK1 RPL27 RPL27 RPS27L RPS27L RPL13 RPL13 RPS16 RPS16 A0A286ZJ84_PIG A0A286ZJ84_PIG RPL15 RPL15 RPL23A RPL23A RPL10 RPL10 RPL24 RPL24 RPL23 RPL23 RPL31 RPL31 RPLP0 RPLP0 RPL7 RPL7 RPS7 RPS7 RPS24 RPS24 RPS15A RPS15A RPL38 RPL38 RPS5 RPS5 RPS15 RPS15 RPL29 RPL29 RPL18A RPL18A RPL27A RPL27A RPS29 RPS29 RPS2 RPS2 LOC100624650 LOC100624650 FAU FAU RPL28 RPL28 CD74 CD74 RPL17-C18orf32 RPL17-C18orf32 RPL3 RPL3 RPL13A RPL13A RPL6 RPL6 A0A287BBK4_PIG A0A287BBK4_PIG RPL32 RPL32 RPL21 RPL21 RPS20 RPS20 RPSA RPSA RPL11 RPL11 RPL37 RPL37 A0A5G2QAN6_PIG A0A5G2QAN6_PIG A0A5G2QQZ4_PIG A0A5G2QQZ4_PIG RPL12 RPL12 RPL4 RPL4 RPL36A-HNRNPH2 RPL36A-HNRNPH2 RPS3 RPS3 RPL35 RPL35 RPL37A RPL37A RPS4X RPS4X RPL5 RPL5 RPL7A RPL7A RPL8 RPL8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS1840S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. (152 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
RPS1240S ribosomal protein S12. (132 aa)
RPL30Ribosomal_L7Ae domain-containing protein. (147 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
RPL3460S ribosomal protein L34; Component of the large ribosomal subunit. (117 aa)
RPL1460S ribosomal protein L14; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL14 family. (213 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (213 aa)
RPS2840S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
RPS2340S ribosomal protein S23; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (143 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
RPL19Ribosomal protein L19. (250 aa)
RPL1860S ribosomal protein L18; Component of the large ribosomal subunit. (219 aa)
RPL26Ribosomal protein L26. (145 aa)
RPS1740S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family. (135 aa)
I3L8W3_PIG40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (108 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
LOC100519675Uncharacterized protein. (139 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
RACK1Receptor of activated protein C kinase 1, N-terminally processed; Scaffolding protein involved in the recruitment, assembly and/or regulation of a variety of signaling molecules. Interacts with a wide variety of proteins and plays a role in many cellular processes. Component of the 40S ribosomal subunit involved in translational repression (By similarity). Involved in the initiation of the ribosome quality control (RQC), a pathway that takes place when a ribosome has stalled during translation, by promoting ubiquitination of a subset of 40S ribosomal subunits (By similarity). Binds to [...] (317 aa)
RPL2760S ribosomal protein L27; Component of the large ribosomal subunit. Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs (By similarity). (136 aa)
RPS27L40S ribosomal protein S27. (84 aa)
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (151 aa)
A0A286ZJ84_PIGUncharacterized protein. (101 aa)
RPL1560S ribosomal protein L15. (204 aa)
RPL23ARibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (156 aa)
RPL1060S ribosomal protein L10; Component of the large ribosomal subunit. Plays a role in the formation of actively translating ribosomes. May play a role in the embryonic brain development. (329 aa)
RPL24Ribosomal protein L24. (217 aa)
RPL2360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
RPL3160S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family. (129 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (322 aa)
RPL7Uncharacterized protein. (249 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (149 aa)
RPS15ARibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (81 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (240 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPL2960S ribosomal protein L29; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL29 family. (255 aa)
RPL18A60S ribosomal protein L18a. (224 aa)
RPL27A60S ribosomal protein L27a. (211 aa)
RPS2940S ribosomal protein S29. (86 aa)
RPS2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (293 aa)
LOC100624650Uncharacterized protein. (192 aa)
FAUUbiquitin-like protein FUBI. (133 aa)
RPL28Ribosomal protein L28. (137 aa)
CD74Thyroglobulin type-1 domain-containing protein. (347 aa)
RPL17-C18orf3260S ribosomal protein L17 isoform a; Belongs to the universal ribosomal protein uL22 family. (186 aa)
RPL360S ribosomal protein L3; The L3 protein is a component of the large subunit of cytoplasmic ribosomes. (403 aa)
RPL13A60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppres [...] (500 aa)
RPL660S ribosomal protein L6; Component of the large ribosomal subunit. (271 aa)
A0A287BBK4_PIG40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (90 aa)
RPL3260S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa)
RPL2160S ribosomal protein L21; Component of the large ribosomal subunit. (160 aa)
RPS2040S ribosomal protein S20. (119 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
RPL1160S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (192 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (100 aa)
A0A5G2QAN6_PIGS10_plectin domain-containing protein. (165 aa)
A0A5G2QQZ4_PIGUbiquitin-like domain-containing protein. (135 aa)
RPL12Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (217 aa)
RPL460S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family. (449 aa)
RPL36A-HNRNPH2RPL36A-HNRNPH2 readthrough; Belongs to the eukaryotic ribosomal protein eL42 family. (154 aa)
RPS340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] (259 aa)
RPL3560S ribosomal protein L35; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL29 family. (123 aa)
RPL37AUncharacterized protein. (107 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
RPL560S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (299 aa)
RPL7A60S ribosomal protein L7a. (334 aa)
RPL8Ribosomal_L2_C domain-containing protein. (319 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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