(17 nodes) Oligosaccharide-lipid intermediate biosynthetic process, and Dolichol-phosphate-mannose synthase complex network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALG12	Mannosyltransferase. (505 aa)
	ALG2	ALG2 alpha-1,3/1,6-mannosyltransferase. (416 aa)
	DOLK	Dolichol kinase. (531 aa)
	ALG1	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1. (468 aa)
	ALG5	Glyco_trans_2-like domain-containing protein. (323 aa)
	ALG11	ALG11 alpha-1,2-mannosyltransferase. (492 aa)
	DPAGT1	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase. (408 aa)
	ALG10	Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase. (478 aa)
	ALG3	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol. (438 aa)
	ALG6	Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family. (679 aa)
	DPM2	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family. (84 aa)
	A0A287B9F4_PIG	Glyco_tran_28_C domain-containing protein. (183 aa)
	ALG14	UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 1. (216 aa)
	DPM1	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins; catalytic subunit of the dolichol-phosphate mannose (DPM) synthase complex. (259 aa)
	ALG13	Uncharacterized protein. (522 aa)
	ALG8	Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family. (574 aa)
	DOLPP1	Dolichyldiphosphatase 1. (240 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287B9F4_PIG	ALG1	ENSSSCP00000052713	ENSSSCP00000008456	Glyco_tran_28_C domain-containing protein.	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	0.672
A0A287B9F4_PIG	ALG11	ENSSSCP00000052713	ENSSSCP00000010011	Glyco_tran_28_C domain-containing protein.	ALG11 alpha-1,2-mannosyltransferase.	0.607
A0A287B9F4_PIG	ALG12	ENSSSCP00000052713	ENSSSCP00000001048	Glyco_tran_28_C domain-containing protein.	Mannosyltransferase.	0.470
A0A287B9F4_PIG	ALG13	ENSSSCP00000052713	ENSSSCP00000060705	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.899
A0A287B9F4_PIG	ALG14	ENSSSCP00000052713	ENSSSCP00000055433	Glyco_tran_28_C domain-containing protein.	UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 1.	0.980
A0A287B9F4_PIG	ALG2	ENSSSCP00000052713	ENSSSCP00000005776	Glyco_tran_28_C domain-containing protein.	ALG2 alpha-1,3/1,6-mannosyltransferase.	0.664
A0A287B9F4_PIG	ALG3	ENSSSCP00000052713	ENSSSCP00000026367	Glyco_tran_28_C domain-containing protein.	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.	0.440
A0A287B9F4_PIG	ALG5	ENSSSCP00000052713	ENSSSCP00000009990	Glyco_tran_28_C domain-containing protein.	Glyco_trans_2-like domain-containing protein.	0.469
A0A287B9F4_PIG	ALG6	ENSSSCP00000052713	ENSSSCP00000037932	Glyco_tran_28_C domain-containing protein.	Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.	0.471
A0A287B9F4_PIG	ALG8	ENSSSCP00000052713	ENSSSCP00000063260	Glyco_tran_28_C domain-containing protein.	Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.	0.471
A0A287B9F4_PIG	DPAGT1	ENSSSCP00000052713	ENSSSCP00000016033	Glyco_tran_28_C domain-containing protein.	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase.	0.786
A0A287B9F4_PIG	DPM1	ENSSSCP00000052713	ENSSSCP00000055745	Glyco_tran_28_C domain-containing protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins; catalytic subunit of the dolichol-phosphate mannose (DPM) synthase complex.	0.504
ALG1	A0A287B9F4_PIG	ENSSSCP00000008456	ENSSSCP00000052713	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	Glyco_tran_28_C domain-containing protein.	0.672
ALG1	ALG11	ENSSSCP00000008456	ENSSSCP00000010011	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	ALG11 alpha-1,2-mannosyltransferase.	0.927
ALG1	ALG12	ENSSSCP00000008456	ENSSSCP00000001048	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	Mannosyltransferase.	0.878
ALG1	ALG13	ENSSSCP00000008456	ENSSSCP00000060705	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	Uncharacterized protein.	0.913
ALG1	ALG14	ENSSSCP00000008456	ENSSSCP00000055433	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform 1.	0.981
ALG1	ALG2	ENSSSCP00000008456	ENSSSCP00000005776	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	ALG2 alpha-1,3/1,6-mannosyltransferase.	0.994
ALG1	ALG3	ENSSSCP00000008456	ENSSSCP00000026367	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.	0.918
ALG1	ALG5	ENSSSCP00000008456	ENSSSCP00000009990	Chitobiosyldiphosphodolichol beta-mannosyltransferase isoform 1.	Glyco_trans_2-like domain-containing protein.	0.878