STRINGSTRING
TRMT1 TRMT1 METTL3 METTL3 FTSJ1 FTSJ1 TGS1 TGS1 CBLL1 CBLL1 EMG1 EMG1 ZCCHC4 ZCCHC4 TFB1M TFB1M TRMT1L TRMT1L TRMT61B TRMT61B METTL1 METTL1 FDXACB1 FDXACB1 WDR4 WDR4 ALKBH8 ALKBH8 FBL FBL TFB2M TFB2M MEPCE MEPCE MRM3 MRM3 HSD17B10 HSD17B10 TRMT13 TRMT13 TRMT61A TRMT61A MRM2 MRM2 CMTR2 CMTR2 WTAP WTAP BCDIN3D BCDIN3D DIMT1 DIMT1 GTPBP3 GTPBP3 FTSJ3 FTSJ3 FBLL1 FBLL1 C11orf54 C11orf54 THUMPD3 THUMPD3 DALRD3 DALRD3 TARBP1 TARBP1 TRMT2A TRMT2A ZC3H13 ZC3H13 THUMPD2 THUMPD2 NSUN5 NSUN5 PCIF1 PCIF1 TRMT6 TRMT6 HENMT1 HENMT1 METTL16 METTL16 LOC110258925 LOC110258925 RBM15 RBM15 VIRMA VIRMA TRMT10B TRMT10B MTO1 MTO1 CMTR1 CMTR1 NOP2 NOP2 TYW3 TYW3 TRMT9B TRMT9B LOC110257936 LOC110257936 METTL8 METTL8 METTL14 METTL14 RAMAC RAMAC METTL2A METTL2A RRNAD1 RRNAD1 NSUN4 NSUN4 TRMT112 TRMT112 TRMT10A TRMT10A NSUN2 NSUN2 A0A5G2QJF6_PIG A0A5G2QJF6_PIG NSUN3 NSUN3 RNMT RNMT METTL6 METTL6 A0A5G2QWJ3_PIG A0A5G2QWJ3_PIG NSUN6 NSUN6 TRDMT1 TRDMT1 METTL5 METTL5 METTL4 METTL4 BUD23 BUD23 METTL15 METTL15 TRMT2B TRMT2B TRMT5 TRMT5 TRMT10C TRMT10C TRMT11 TRMT11 LYRM9 LYRM9 WDR6 WDR6 TRMT44 TRMT44
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TRMT1tRNA (guanine(26)-N(2))-dimethyltransferase. (660 aa)
METTL3N6-adenosine-methyltransferase catalytic subunit; Belongs to the MT-A70-like family. (580 aa)
FTSJ1Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (368 aa)
TGS1Trimethylguanosine synthase 1. (779 aa)
CBLL1Cbl proto-oncogene like 1. (529 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform 1. (244 aa)
ZCCHC4Zinc finger CCHC domain-containing protein 4 isoform 1. (513 aa)
TFB1MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (340 aa)
TRMT1LtRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (818 aa)
TRMT61BtRNA methyltransferase 61B. (492 aa)
METTL1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (277 aa)
FDXACB1Ferredoxin-fold anticodon-binding domain-containing protein 1. (625 aa)
WDR4tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (416 aa)
ALKBH8AlkB homolog 8, tRNA methyltransferase. (614 aa)
FBLFibrillarin. (321 aa)
TFB2MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (391 aa)
MEPCEMethylphosphate capping enzyme. (744 aa)
MRM3Mitochondrial rRNA methyltransferase 3. (422 aa)
HSD17B10Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (293 aa)
TRMT13tRNA:m(4)X modification enzyme TRM13 homolog. (481 aa)
TRMT61AtRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (285 aa)
MRM2FtsJ domain-containing protein. (246 aa)
CMTR2Cap methyltransferase 2. (764 aa)
WTAPUncharacterized protein. (649 aa)
BCDIN3DBCDIN3 domain containing RNA methyltransferase. (302 aa)
DIMT1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (313 aa)
GTPBP3GTP binding protein 3, mitochondrial. (515 aa)
FTSJ3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (836 aa)
FBLL1rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (332 aa)
C11orf54Chromosome 11 open reading frame 54. (315 aa)
THUMPD3THUMP domain-containing protein 3 isoform X1. (503 aa)
DALRD3DALR anticodon-binding domain-containing protein 3 isoform 1. (592 aa)
TARBP1TAR (HIV-1) RNA binding protein 1. (1613 aa)
TRMT2AtRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (621 aa)
ZC3H13Zinc finger CCCH-type containing 13. (1640 aa)
THUMPD2THUMP domain containing 2. (584 aa)
NSUN5NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (466 aa)
PCIF1Phosphorylated CTD-interacting factor 1 isoform X1. (703 aa)
TRMT6tRNA methyltransferase 6. (693 aa)
HENMT1HEN methyltransferase 1. (383 aa)
METTL16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (561 aa)
LOC110258925Putative GTP-binding protein 6. (519 aa)
RBM15RNA binding motif protein 15. (1006 aa)
VIRMAVir like m6A methyltransferase associated. (1812 aa)
TRMT10BtRNA methyltransferase 10 homolog B isoform a. (316 aa)
MTO1Mitochondrial tRNA translation optimization 1. (691 aa)
CMTR1Cap methyltransferase 1. (834 aa)
NOP2SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (822 aa)
TYW3tRNA wybutosine-synthesizing protein 3 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA (By similarity). (259 aa)
TRMT9BtRNA methyltransferase 9B (putative). (457 aa)
LOC110257936Putative GTP-binding protein 6. (519 aa)
METTL8Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (426 aa)
METTL14N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family. (456 aa)
RAMACUncharacterized protein. (118 aa)
METTL2AUncharacterized protein. (444 aa)
RRNAD1Ribosomal RNA adenine dimethylase domain containing 1. (475 aa)
NSUN4NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (382 aa)
TRMT112Multifunctional methyltransferase subunit TRM112-like protein isoform X1. (154 aa)
TRMT10AtRNA methyltransferase 10A. (401 aa)
NSUN2NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (992 aa)
A0A5G2QJF6_PIGSAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (105 aa)
NSUN3NOP2/Sun RNA methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (339 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (477 aa)
METTL6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (284 aa)
A0A5G2QWJ3_PIGUncharacterized protein. (267 aa)
NSUN6NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (598 aa)
TRDMT1tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (398 aa)
METTL5Methyltransferase like 5. (226 aa)
METTL4Methyltransferase like 4; Belongs to the MT-A70-like family. (478 aa)
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (372 aa)
METTL15Methyltransferase like 15. (404 aa)
TRMT2BtRNA methyltransferase 2 homolog B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (503 aa)
TRMT5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (504 aa)
TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit. (415 aa)
TRMT11tRNA methyltransferase 11 homolog. (494 aa)
LYRM9Uncharacterized protein; Belongs to the complex I LYR family. (103 aa)
WDR6WD repeat domain 6. (1120 aa)
TRMT44tRNA methyltransferase 44 homolog. (783 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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