STRINGSTRING
SPDEF SPDEF HES1 HES1 WNT3A WNT3A TBX21 TBX21 MESP1 MESP1 SFRP2 SFRP2 FZD7 FZD7 LOXL3 LOXL3 SOSTDC1 SOSTDC1 NKX6-2 NKX6-2 NANOG NANOG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPDEFSAM pointed domain containing ETS transcription factor. (363 aa)
HES1Uncharacterized protein. (280 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
TBX21Uncharacterized protein. (535 aa)
MESP1Mesoderm posterior bHLH transcription factor 1. (256 aa)
SFRP2Uncharacterized protein. (294 aa)
FZD7Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (574 aa)
LOXL3Lysyl oxidase like 3. (814 aa)
SOSTDC1Sclerostin domain containing 1. (229 aa)
NKX6-2Homeobox protein Nkx-6.2. (277 aa)
NANOGHomeobox domain-containing protein. (304 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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