16 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ERN2	Endoplasmic reticulum to nucleus signaling 2. (989 aa)
	EXOSC6	Exosome component 6. (272 aa)
	EXOSC5	Exosome component 5. (299 aa)
	EXOSC10	Exosome component 10. (869 aa)
	DIS3L	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1054 aa)
	ZCCHC7	Zinc finger CCHC-type containing 7. (545 aa)
	EXOSC3	Exosome complex component RRP40 isoform 1. (275 aa)
	EXOSC4	Exosome complex component RRP41. (245 aa)
	EXOSC7	Uncharacterized protein. (349 aa)
	PELO	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (384 aa)
	EXOSC9	Exosome component 9. (455 aa)
	SLFN14	Schlafen family member 14. (912 aa)
	EXOSC8	Exosome component 8. (281 aa)
	DIS3	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (958 aa)
	XRN1	5'-3' exoribonuclease 1. (1703 aa)
	EXOSC2	Exosome component 2. (271 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DIS3	DIS3L	ENSSSCP00000060654	ENSSSCP00000005318	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.608
DIS3	EXOSC10	ENSSSCP00000060654	ENSSSCP00000003698	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 10.	0.998
DIS3	EXOSC2	ENSSSCP00000060654	ENSSSCP00000071461	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 2.	0.987
DIS3	EXOSC3	ENSSSCP00000060654	ENSSSCP00000005748	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome complex component RRP40 isoform 1.	0.998
DIS3	EXOSC4	ENSSSCP00000060654	ENSSSCP00000006334	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome complex component RRP41.	0.996
DIS3	EXOSC5	ENSSSCP00000060654	ENSSSCP00000003265	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 5.	0.991
DIS3	EXOSC6	ENSSSCP00000060654	ENSSSCP00000002934	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 6.	0.945
DIS3	EXOSC7	ENSSSCP00000060654	ENSSSCP00000012048	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.987
DIS3	EXOSC8	ENSSSCP00000060654	ENSSSCP00000060162	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 8.	0.996
DIS3	EXOSC9	ENSSSCP00000060654	ENSSSCP00000034219	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 9.	0.991
DIS3	XRN1	ENSSSCP00000060654	ENSSSCP00000067024	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	5'-3' exoribonuclease 1.	0.786
DIS3L	DIS3	ENSSSCP00000005318	ENSSSCP00000060654	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.608
DIS3L	EXOSC10	ENSSSCP00000005318	ENSSSCP00000003698	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 10.	0.996
DIS3L	EXOSC2	ENSSSCP00000005318	ENSSSCP00000071461	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 2.	0.988
DIS3L	EXOSC3	ENSSSCP00000005318	ENSSSCP00000005748	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome complex component RRP40 isoform 1.	0.990
DIS3L	EXOSC4	ENSSSCP00000005318	ENSSSCP00000006334	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome complex component RRP41.	0.993
DIS3L	EXOSC5	ENSSSCP00000005318	ENSSSCP00000003265	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 5.	0.992
DIS3L	EXOSC6	ENSSSCP00000005318	ENSSSCP00000002934	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 6.	0.992
DIS3L	EXOSC7	ENSSSCP00000005318	ENSSSCP00000012048	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.989
DIS3L	EXOSC8	ENSSSCP00000005318	ENSSSCP00000060162	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 8.	0.992