(23 nodes) CoA hydrolase activity network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PLA2G6	Phospholipase A2 group VI. (806 aa)
	ABCD2	ATP-binding cassette sub-family D member 2 isoform X1. (741 aa)
	ACAA2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
	LOC110255172	Uncharacterized protein. (418 aa)
	THEM5	Acyl-coenzyme A thioesterase THEM5. (247 aa)
	ABCD1	ATP binding cassette subfamily D member 1. (732 aa)
	MBLAC2	Metallo-beta-lactamase domain containing 2. (279 aa)
	LOC100737821	4HBT domain-containing protein. (267 aa)
	ACOT8	Acyl-coenzyme A thioesterase 8. (317 aa)
	PCOLCE	Procollagen C-endopeptidase enhancer 1. (470 aa)
	AAMDC	Uncharacterized protein. (122 aa)
	BAAT	Bile acid-CoA:amino acid N-acyltransferase. (407 aa)
	ABCD3	ATP binding cassette subfamily D member 3. (659 aa)
	ACOT13	Acyl-CoA thioesterase 13. (141 aa)
	ACOT12	Acyl-coenzyme A thioesterase 12 isoform X1. (559 aa)
	ACOT4	Acyl-CoA thioesterase 4. (507 aa)
	ACOT11	Acyl-CoA thioesterase 11. (598 aa)
	A0A287BKN3_PIG	Uncharacterized protein. (95 aa)
	HIBCH	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (386 aa)
	ACOT7	Acyl-CoA thioesterase 7. (406 aa)
	LOC100515185	Uncharacterized protein. (423 aa)
	NUDT7	Nudix hydrolase 7. (237 aa)
	ACOT9	Acyl-CoA thioesterase 9. (449 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD1	ABCD2	ENSSSCP00000013588	ENSSSCP00000000828	ATP binding cassette subfamily D member 1.	ATP-binding cassette sub-family D member 2 isoform X1.	0.901
ABCD1	ABCD3	ENSSSCP00000013588	ENSSSCP00000045481	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 3.	0.935
ABCD2	ABCD1	ENSSSCP00000000828	ENSSSCP00000013588	ATP-binding cassette sub-family D member 2 isoform X1.	ATP binding cassette subfamily D member 1.	0.901
ABCD2	ABCD3	ENSSSCP00000000828	ENSSSCP00000045481	ATP-binding cassette sub-family D member 2 isoform X1.	ATP binding cassette subfamily D member 3.	0.935
ABCD2	ACAA2	ENSSSCP00000000828	ENSSSCP00000004865	ATP-binding cassette sub-family D member 2 isoform X1.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.494
ABCD3	ABCD1	ENSSSCP00000045481	ENSSSCP00000013588	ATP binding cassette subfamily D member 3.	ATP binding cassette subfamily D member 1.	0.935
ABCD3	ABCD2	ENSSSCP00000045481	ENSSSCP00000000828	ATP binding cassette subfamily D member 3.	ATP-binding cassette sub-family D member 2 isoform X1.	0.935
ACAA2	ABCD2	ENSSSCP00000004865	ENSSSCP00000000828	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	ATP-binding cassette sub-family D member 2 isoform X1.	0.494
ACAA2	ACOT8	ENSSSCP00000004865	ENSSSCP00000020956	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A thioesterase 8.	0.545
ACAA2	HIBCH	ENSSSCP00000004865	ENSSSCP00000062904	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.723
ACAA2	LOC100737821	ENSSSCP00000004865	ENSSSCP00000020135	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	4HBT domain-containing protein.	0.591
ACOT11	ACOT12	ENSSSCP00000052425	ENSSSCP00000049040	Acyl-CoA thioesterase 11.	Acyl-coenzyme A thioesterase 12 isoform X1.	0.421
ACOT11	ACOT13	ENSSSCP00000052425	ENSSSCP00000048575	Acyl-CoA thioesterase 11.	Acyl-CoA thioesterase 13.	0.800
ACOT11	ACOT7	ENSSSCP00000052425	ENSSSCP00000064432	Acyl-CoA thioesterase 11.	Acyl-CoA thioesterase 7.	0.555
ACOT11	ACOT8	ENSSSCP00000052425	ENSSSCP00000020956	Acyl-CoA thioesterase 11.	Acyl-coenzyme A thioesterase 8.	0.516
ACOT11	ACOT9	ENSSSCP00000052425	ENSSSCP00000066681	Acyl-CoA thioesterase 11.	Acyl-CoA thioesterase 9.	0.574
ACOT11	THEM5	ENSSSCP00000052425	ENSSSCP00000007053	Acyl-CoA thioesterase 11.	Acyl-coenzyme A thioesterase THEM5.	0.508
ACOT12	ACOT11	ENSSSCP00000049040	ENSSSCP00000052425	Acyl-coenzyme A thioesterase 12 isoform X1.	Acyl-CoA thioesterase 11.	0.421
ACOT12	ACOT13	ENSSSCP00000049040	ENSSSCP00000048575	Acyl-coenzyme A thioesterase 12 isoform X1.	Acyl-CoA thioesterase 13.	0.696
ACOT12	ACOT7	ENSSSCP00000049040	ENSSSCP00000064432	Acyl-coenzyme A thioesterase 12 isoform X1.	Acyl-CoA thioesterase 7.	0.535