STRINGSTRING
TRMT10C TRMT10C TRMT5 TRMT5 TRMT1L TRMT1L TRMT1 TRMT1 THUMPD2 THUMPD2 TRMT10B TRMT10B WDR4 WDR4 TARBP1 TARBP1 THUMPD3 THUMPD3 TRMT10A TRMT10A TRMT11 TRMT11 METTL1 METTL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit. (415 aa)
TRMT5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (504 aa)
TRMT1LtRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (818 aa)
TRMT1tRNA (guanine(26)-N(2))-dimethyltransferase. (660 aa)
THUMPD2THUMP domain containing 2. (584 aa)
TRMT10BtRNA methyltransferase 10 homolog B isoform a. (316 aa)
WDR4tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (416 aa)
TARBP1TAR (HIV-1) RNA binding protein 1. (1613 aa)
THUMPD3THUMP domain-containing protein 3 isoform X1. (503 aa)
TRMT10AtRNA methyltransferase 10A. (401 aa)
TRMT11tRNA methyltransferase 11 homolog. (494 aa)
METTL1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (277 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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