(11 nodes) Retinol binding network (Sus scrofa)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	RLBP1	Retinaldehyde binding protein 1. (384 aa)
	C8G	Complement C8 gamma chain. (257 aa)
	PAEP	Beta-lactoglobulin-1A/1C; Lactoglobulin is the primary component of whey, it binds retinol and is probably involved in the transport of that molecule. (268 aa)
	RBP2	Retinol-binding protein 2; Intracellular transport of retinol. (184 aa)
	RBP1	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (136 aa)
	STRA6	Stimulated by retinoic acid 6. (666 aa)
	CRABP2	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (138 aa)
	CYP2W1	Cytochrome P450 family 2 subfamily W member 1; Belongs to the cytochrome P450 family. (469 aa)
	ADH4	Alcohol dehydrogenase 4 isoform 2. (380 aa)
	CRABP1	Cellular retinoic acid-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)
	RBP4	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family. (238 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRABP1	STRA6	ENSSSCP00000023870	ENSSSCP00000002088	Cellular retinoic acid-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Stimulated by retinoic acid 6.	0.451
CRABP2	STRA6	ENSSSCP00000006897	ENSSSCP00000002088	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Stimulated by retinoic acid 6.	0.551
RBP1	RBP4	ENSSSCP00000067594	ENSSSCP00000038691	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	0.563
RBP1	RLBP1	ENSSSCP00000067594	ENSSSCP00000041134	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Retinaldehyde binding protein 1.	0.497
RBP1	STRA6	ENSSSCP00000067594	ENSSSCP00000002088	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Stimulated by retinoic acid 6.	0.763
RBP2	RBP4	ENSSSCP00000071182	ENSSSCP00000038691	Retinol-binding protein 2; Intracellular transport of retinol.	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	0.526
RBP2	STRA6	ENSSSCP00000071182	ENSSSCP00000002088	Retinol-binding protein 2; Intracellular transport of retinol.	Stimulated by retinoic acid 6.	0.430
RBP4	RBP1	ENSSSCP00000038691	ENSSSCP00000067594	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.563
RBP4	RBP2	ENSSSCP00000038691	ENSSSCP00000071182	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	Retinol-binding protein 2; Intracellular transport of retinol.	0.526
RBP4	STRA6	ENSSSCP00000038691	ENSSSCP00000002088	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	Stimulated by retinoic acid 6.	0.801
RLBP1	RBP1	ENSSSCP00000041134	ENSSSCP00000067594	Retinaldehyde binding protein 1.	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.497
STRA6	CRABP1	ENSSSCP00000002088	ENSSSCP00000023870	Stimulated by retinoic acid 6.	Cellular retinoic acid-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.451
STRA6	CRABP2	ENSSSCP00000002088	ENSSSCP00000006897	Stimulated by retinoic acid 6.	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.551
STRA6	RBP1	ENSSSCP00000002088	ENSSSCP00000067594	Stimulated by retinoic acid 6.	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.763
STRA6	RBP2	ENSSSCP00000002088	ENSSSCP00000071182	Stimulated by retinoic acid 6.	Retinol-binding protein 2; Intracellular transport of retinol.	0.430
STRA6	RBP4	ENSSSCP00000002088	ENSSSCP00000038691	Stimulated by retinoic acid 6.	Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.	0.801