STRINGSTRING
RPL37 RPL37 RPL11 RPL11 TST TST A0A287BM12_PIG A0A287BM12_PIG GTF3A GTF3A LIPE LIPE A0A287BCR5_PIG A0A287BCR5_PIG NSUN4 NSUN4 A0A287B0X4_PIG A0A287B0X4_PIG TACO1 TACO1 LOC100624650 LOC100624650 RPS18 RPS18 IMP3 IMP3 RPS11 RPS11 MRPL18 MRPL18 A0A288CG20_PIG A0A288CG20_PIG RRS1 RRS1 AKNAD1 AKNAD1 RCC1L RCC1L SBDS SBDS F1S4M2_PIG F1S4M2_PIG A0A287ARH8_PIG A0A287ARH8_PIG A0A287API6_PIG A0A287API6_PIG RPS5 RPS5 MRPS18C MRPS18C RPLP0 RPLP0 DDX21 DDX21 RPL23 RPL23 CAVIN1 CAVIN1 A0A286ZYG1_PIG A0A286ZYG1_PIG A0A286ZXN8_PIG A0A286ZXN8_PIG MRPL20 MRPL20 A0A286ZN03_PIG A0A286ZN03_PIG MRPS11 MRPS11 MRPS7 MRPS7 PTCD3 PTCD3 NOP53 NOP53 UTP23 UTP23 EMG1 EMG1 RPF1 RPF1 RPS9 RPS9 MRPS6 MRPS6 I3LBH4_PIG I3LBH4_PIG DDX28 DDX28 ERAL1 ERAL1 FASTKD2 FASTKD2 IMP4 IMP4 UTP25 UTP25 RPUSD4 RPUSD4 CCDC105 CCDC105 PPAN PPAN RPS13 RPS13 MRPL16 MRPL16 NOL12 NOL12 FASTKD5 FASTKD5 MRPS18A MRPS18A A0A5G2QXY3_PIG A0A5G2QXY3_PIG RPF2 RPF2 MRPS27 MRPS27 RPL5 RPL5 RPS4X RPS4X A0A5G2QKA8_PIG A0A5G2QKA8_PIG RPS3 RPS3 A0A5G2QT67_PIG A0A5G2QT67_PIG RPL12 RPL12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (100 aa)
RPL1160S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (192 aa)
TSTSulfurtransferase. (350 aa)
A0A287BM12_PIGRibosomal_L6 domain-containing protein. (119 aa)
GTF3AGeneral transcription factor IIIA. (407 aa)
LIPEHormone-sensitive lipase; In adipose tissue and heart, it primarily hydrolyzes stored triglycerides to free fatty acids, while in steroidogenic tissues, it principally converts cholesteryl esters to free cholesterol for steroid hormone production. (1057 aa)
A0A287BCR5_PIGUncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (135 aa)
NSUN4NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (382 aa)
A0A287B0X4_PIGUncharacterized protein. (78 aa)
TACO1Uncharacterized protein. (321 aa)
LOC100624650Uncharacterized protein. (192 aa)
RPS1840S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. (152 aa)
IMP3S4 RNA-binding domain-containing protein. (184 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
MRPL1839S ribosomal protein L18, mitochondrial isoform 1. (180 aa)
A0A288CG20_PIGUncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (89 aa)
RRS1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
AKNAD1Uncharacterized protein. (393 aa)
RCC1LRCC1 like. (490 aa)
SBDSRibosome maturation protein SBDS. (250 aa)
F1S4M2_PIGUncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
A0A287ARH8_PIGRibosomal_S13_N domain-containing protein. (73 aa)
A0A287API6_PIGUncharacterized protein. (88 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (240 aa)
MRPS18CMitochondrial ribosomal protein S18C. (194 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (322 aa)
DDX21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (784 aa)
RPL2360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
CAVIN1Caveolae associated protein 1. (458 aa)
A0A286ZYG1_PIGUncharacterized protein. (75 aa)
A0A286ZXN8_PIGRibosomal_L6 domain-containing protein. (143 aa)
MRPL2039S ribosomal protein L20, mitochondrial isoform 1; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
A0A286ZN03_PIGRibosomal_L5 domain-containing protein. (174 aa)
MRPS11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (196 aa)
MRPS728S ribosomal protein S7, mitochondrial. (242 aa)
PTCD3Pentatricopeptide repeat domain 3. (699 aa)
NOP53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (470 aa)
UTP23UTP23 small subunit processome component. (251 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform 1. (244 aa)
RPF1Ribosome production factor 1 homolog. (349 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
MRPS6Uncharacterized protein. (276 aa)
I3LBH4_PIGUncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
DDX28DEAD-box helicase 28. (540 aa)
ERAL1Era like 12S mitochondrial rRNA chaperone 1. (437 aa)
FASTKD2FAST kinase domain-containing protein 2, mitochondrial. (689 aa)
IMP4U3 small nucleolar ribonucleoprotein IMP4 isoform a. (291 aa)
UTP25UTP25 small subunit processor component. (760 aa)
RPUSD4RNA pseudouridylate synthase domain-containing protein 4. (376 aa)
CCDC105Coiled-coil domain containing 105. (495 aa)
PPANSuppressor of SWI4 1 homolog isoform 1. (469 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (213 aa)
MRPL1639S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (251 aa)
NOL12Uncharacterized protein. (309 aa)
FASTKD5FAST kinase domains 5. (813 aa)
MRPS18AMitochondrial ribosomal protein S18A. (256 aa)
A0A5G2QXY3_PIGUncharacterized protein. (126 aa)
RPF2Ribosome production factor 2 homolog. (306 aa)
MRPS27Mitochondrial ribosomal protein S27. (455 aa)
RPL560S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (299 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
A0A5G2QKA8_PIGRibosomal_L6 domain-containing protein. (101 aa)
RPS340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] (259 aa)
A0A5G2QT67_PIGRibosomal_L6 domain-containing protein. (101 aa)
RPL12Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (217 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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