STRINGSTRING
MAK16 MAK16 ZNF622 ZNF622 WDR12 WDR12 IMP4 IMP4 SNU13 SNU13 UTP20 UTP20 IMP3 IMP3 NOP9 NOP9 NOB1 NOB1 F1SUY3_PIG F1SUY3_PIG UTP11 UTP11 MDN1 MDN1 MPHOSPH10 MPHOSPH10 DCAF13 DCAF13 RRS1 RRS1 PRKDC PRKDC WDR3 WDR3 NOP56 NOP56 NOP14 NOP14 NOC4L NOC4L PES1 PES1 UTP18 UTP18 RRP1B RRP1B FBL FBL EBNA1BP2 EBNA1BP2 NOP58 NOP58 UTP3 UTP3 BYSL BYSL HUNK HUNK RSL1D1 RSL1D1 NSA2 NSA2 SRFBP1 SRFBP1 WDR46 WDR46 LTV1 LTV1 KRR1 KRR1 TBL3 TBL3 TSR1 TSR1 RIOK2 RIOK2 RIOK3 RIOK3 FBLL1 FBLL1 NGDN NGDN WDR74 WDR74 FCF1 FCF1 RRP1 RRP1 A0A287AJR4_PIG A0A287AJR4_PIG UTP6 UTP6 UTP25 UTP25 PPAN PPAN RIOK1 RIOK1 KRI1 KRI1 UTP14A UTP14A LAS1L LAS1L NOL6 NOL6 PDCD11 PDCD11 HEATR1 HEATR1 FAM207A FAM207A A0A286ZLE8_PIG A0A286ZLE8_PIG MRTO4 MRTO4 NOL10 NOL10 WDR36 WDR36 RPS7 RPS7 RRP15 RRP15 EIF6 EIF6 NIP7 NIP7 A0A5G2QWJ3_PIG A0A5G2QWJ3_PIG PWP2 PWP2 RRP7A RRP7A UTP4 UTP4 UBE4A UBE4A XRCC5 XRCC5 NOC2L NOC2L RPF1 RPF1 BMS1 BMS1 EMG1 EMG1 UTP23 UTP23 RRP9 RRP9 FTSJ3 FTSJ3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAK16Protein MAK16 homolog; Belongs to the MAK16 family. (297 aa)
ZNF622Zinc finger protein 622. (473 aa)
WDR12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
IMP4U3 small nucleolar ribonucleoprotein IMP4 isoform a. (291 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
UTP20UTP20 small subunit processome component. (2781 aa)
IMP3S4 RNA-binding domain-containing protein. (184 aa)
NOP9NOP9 nucleolar protein. (637 aa)
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (413 aa)
F1SUY3_PIGUncharacterized protein. (308 aa)
UTP11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
MDN1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5596 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (680 aa)
DCAF13DDB1 and CUL4 associated factor 13. (444 aa)
RRS1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4136 aa)
WDR3WD repeat domain 3. (943 aa)
NOP56NOP56 ribonucleoprotein. (596 aa)
NOP14NOP14 nucleolar protein. (852 aa)
NOC4LNucleolar complex associated 4 homolog. (543 aa)
PES1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (597 aa)
UTP18U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
RRP1BRibosomal RNA processing 1B. (739 aa)
FBLFibrillarin. (321 aa)
EBNA1BP2EBNA1 binding protein 2. (400 aa)
NOP58NOP58 ribonucleoprotein. (546 aa)
UTP3Sas10 domain-containing protein. (474 aa)
BYSLUncharacterized protein. (435 aa)
HUNKHormonally up-regulated Neu-associated kinase. (714 aa)
RSL1D1Ribosomal L1 domain-containing protein 1. (493 aa)
NSA2Ribosome biogenesis protein NSA2 homolog isoform 1. (260 aa)
SRFBP1Serum response factor binding protein 1. (515 aa)
WDR46WD repeat-containing protein 46 isoform 1. (656 aa)
LTV1LTV1 ribosome biogenesis factor. (475 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (375 aa)
TBL3Transducin beta like 3. (889 aa)
TSR1TSR1 ribosome maturation factor. (763 aa)
RIOK2RIO domain-containing protein. (190 aa)
RIOK3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
FBLL1rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (332 aa)
NGDNUncharacterized protein. (328 aa)
WDR74Uncharacterized protein. (388 aa)
FCF1FCF1 rRNA-processing protein. (198 aa)
RRP1Ribosomal RNA processing protein 1 homolog A. (447 aa)
A0A287AJR4_PIGRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
UTP6UTP6 small subunit processome component. (598 aa)
UTP25UTP25 small subunit processor component. (760 aa)
PPANSuppressor of SWI4 1 homolog isoform 1. (469 aa)
RIOK1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (565 aa)
KRI1KRI1 homolog. (708 aa)
UTP14AUncharacterized protein. (773 aa)
LAS1LLAS1 like, ribosome biogenesis factor. (721 aa)
NOL6Nucleolar protein 6. (1145 aa)
PDCD11Programmed cell death 11. (1875 aa)
HEATR1HEAT repeat containing 1. (2141 aa)
FAM207AUncharacterized protein. (266 aa)
A0A286ZLE8_PIGRibosomal_L7Ae domain-containing protein. (74 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (272 aa)
NOL10Nucleolar protein 10 isoform 1. (688 aa)
WDR36WD repeat domain 36. (895 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RRP15Ribosomal RNA processing 15 homolog. (303 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (246 aa)
NIP760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (192 aa)
A0A5G2QWJ3_PIGUncharacterized protein. (267 aa)
PWP2Uncharacterized protein. (1096 aa)
RRP7ARibosomal RNA processing 7 homolog A. (412 aa)
UTP4U3 small nucleolar RNA-associated protein 4 homolog isoform 1. (686 aa)
UBE4AU-box domain-containing protein. (1074 aa)
XRCC5X-ray repair cross complementing 5. (1011 aa)
NOC2LNOC2 like nucleolar associated transcriptional repressor. (713 aa)
RPF1Ribosome production factor 1 homolog. (349 aa)
BMS1BMS1 ribosome biogenesis factor. (1284 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform 1. (244 aa)
UTP23UTP23 small subunit processome component. (251 aa)
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
FTSJ3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (836 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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