STRINGSTRING
POU5F1 POU5F1 RXRB RXRB PTK7 PTK7 CTSH CTSH GATA6 GATA6 TIE1 TIE1 BRINP1 BRINP1 SETX SETX LYN LYN ASXL1 ASXL1 CYP26B1 CYP26B1 PTK2B PTK2B RET RET TWF2 TWF2 NDUFA13 NDUFA13 ATM ATM STRA8 STRA8 HOXA2 HOXA2 SOX9 SOX9 SNW1 SNW1 TBX2 TBX2 EPHA3 EPHA3 GDAP2 GDAP2 RARG RARG YAP1 YAP1 CDKN2D CDKN2D TEAD2 TEAD2 RARA RARA CREB1 CREB1 OSR1 OSR1 GDAP1 GDAP1 PTK6 PTK6 ACER2 ACER2 BRINP2 BRINP2 RBP4 RBP4 HTRA2 HTRA2 BRINP3 BRINP3 TMEM161A TMEM161A GSK3B GSK3B ABL2 ABL2 HSD17B2 HSD17B2 AQP3 AQP3 NANOG NANOG RXRG RXRG BHMG1 BHMG1 TRIM16 TRIM16 ADH1C ADH1C AQP1 AQP1 ADNP2 ADNP2 SLC10A3 SLC10A3 RXRA RXRA ALDH1A2 ALDH1A2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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POU5F1POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency. Belongs to the POU transcription factor family. Class-5 subfamily. (361 aa)
RXRBRetinoid X receptor beta. (536 aa)
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1070 aa)
CTSHCathepsin H heavy chain; Important for the overall degradation of proteins in lysosomes; Belongs to the peptidase C1 family. (335 aa)
GATA6Transcription factor GATA-6; Transcriptional activator that regulates SEMA3C and PLXNA2. May regulate genes that protect epithelial cells from bacterial infection. Involved in gene regulation specifically in the gastric epithelium. Involved in bone morphogenetic protein (BMP)-mediated cardiac-specific gene expression. Binds to BMP response element (BMPRE) DNA sequences within cardiac activating regions. (592 aa)
TIE1Tyrosine kinase with immunoglobulin like and EGF like domains 1. (1138 aa)
BRINP1BMP/retinoic acid-inducible neural-specific protein 1 isoform X1. (761 aa)
SETXSenataxin. (2676 aa)
LYNTyrosine-protein kinase. (512 aa)
ASXL1ASXL transcriptional regulator 1. (1542 aa)
CYP26B1Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family. (512 aa)
PTK2BProtein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1009 aa)
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1111 aa)
TWF2Twinfilin actin binding protein 2. (500 aa)
NDUFA13Uncharacterized protein. (144 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and monospec [...] (3057 aa)
STRA8Stimulated by retinoic acid 8. (365 aa)
HOXA2Homeobox protein Hox-A2. (380 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
SNW1SNW domain-containing protein 1 isoform 2. (536 aa)
TBX2T-box 2 protein. (714 aa)
EPHA3Ephrin type-A receptor 3 isoform X1. (984 aa)
GDAP2Ganglioside induced differentiation associated protein 2. (496 aa)
RARGRetinoic acid receptor gamma. (554 aa)
YAP1Yes associated protein 1. (432 aa)
CDKN2DCyclin dependent kinase inhibitor 2D. (166 aa)
TEAD2TEA domain transcription factor 2. (457 aa)
RARARetinoic acid receptor alpha isoform X1. (462 aa)
CREB1Cyclic AMP-responsive element-binding protein 1 isoform B. (341 aa)
OSR1Odd-skipped related transcription factor 1. (267 aa)
GDAP1Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (362 aa)
PTK6Tyrosine-protein kinase. (449 aa)
ACER2Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (274 aa)
BRINP2BMP/retinoic acid inducible neural specific 2. (787 aa)
RBP4Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family. (238 aa)
HTRA2HtrA serine peptidase 2. (444 aa)
BRINP3BMP/retinoic acid inducible neural specific 3. (766 aa)
TMEM161ATransmembrane protein 161A. (479 aa)
GSK3BGlycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (414 aa)
ABL2Tyrosine-protein kinase. (1096 aa)
HSD17B2Estradiol 17-beta-dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (388 aa)
AQP3Aquaporin-3; Water channel required to promote glycerol permeability and water transport across cell membranes. Acts as a glycerol transporter in skin and plays an important role in regulating SC (stratum corneum) and epidermal glycerol content. Involved in skin hydration, wound healing, and tumorigenesis. Provides kidney medullary collecting duct with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Slightly permeable to urea and may function as a water and urea exit mechanism in antidiuresis in collecting duct cells. It may play an [...] (290 aa)
NANOGHomeobox domain-containing protein. (304 aa)
RXRGRetinoic acid receptor RXR-gamma; Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5. The high affinity ligand for RXRs is 9-cis retinoic acid (By similarity). (463 aa)
BHMG1Basic helix-loop-helix and HMG-box containing 1. (550 aa)
TRIM16Uncharacterized protein. (582 aa)
ADH1CPKS_ER domain-containing protein. (388 aa)
AQP1Aquaporin-1; Forms a water-specific channel that provides the plasma membranes of red cells and kidney proximal tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. (280 aa)
ADNP2ADNP homeobox 2. (1197 aa)
SLC10A3Solute carrier family 10 member 3. (477 aa)
RXRARetinoid X receptor alpha. (701 aa)
ALDH1A2Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family. (527 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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