STRINGSTRING
P3H3 P3H3 COL5A1 COL5A1 ADAMTS2 ADAMTS2 RCN3 RCN3 SERPINH1 SERPINH1 TRAM2 TRAM2 ADAMTS3 ADAMTS3 COL1A1 COL1A1 P3H4 P3H4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
P3H3Prolyl 3-hydroxylase 3. (727 aa)
COL5A1Fibrillar collagen NC1 domain-containing protein. (1918 aa)
ADAMTS2ADAM metallopeptidase with thrombospondin type 1 motif 2. (1204 aa)
RCN3Reticulocalbin 3. (335 aa)
SERPINH1SERPIN domain-containing protein; Belongs to the serpin family. (418 aa)
TRAM2Translocation associated membrane protein 2. (392 aa)
ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3. (1220 aa)
COL1A1Collagen type I alpha 1 chain. (1477 aa)
P3H4Prolyl 3-hydroxylase family member 4 (non-enzymatic). (455 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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