STRINGSTRING
DDX6 DDX6 DDX3X DDX3X GRB7 GRB7 TIA1 TIA1 YTHDF1 YTHDF1 ATXN2 ATXN2 PRRC2C PRRC2C G3BP1 G3BP1 EIF2S1 EIF2S1 OGFOD1 OGFOD1 PUM2 PUM2 ATXN2L ATXN2L YTHDF3 YTHDF3 C9orf72 C9orf72 DYNC1H1 DYNC1H1 G3BP2 G3BP2 CSDE1 CSDE1 YTHDF2 YTHDF2 LSM14A LSM14A UBAP2L UBAP2L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDX6Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family. (483 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform 1; Belongs to the DEAD box helicase family. (662 aa)
GRB7Growth factor receptor bound protein 7. (569 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (652 aa)
ATXN2Ataxin 2. (1335 aa)
PRRC2CProline rich coiled-coil 2C. (2894 aa)
G3BP1G3BP stress granule assembly factor 1. (495 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] (315 aa)
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (560 aa)
PUM2Pumilio RNA binding family member 2. (1072 aa)
ATXN2LAtaxin 2 like. (1080 aa)
YTHDF3YTH domain-containing family protein 3 isoform b. (588 aa)
C9orf72C9orf72-SMCR8 complex subunit. (489 aa)
DYNC1H1Dynein cytoplasmic 1 heavy chain 1. (4645 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (481 aa)
CSDE1Cold shock domain containing E1. (851 aa)
YTHDF2YTH N6-methyladenosine RNA binding protein 2. (600 aa)
LSM14AUncharacterized protein. (475 aa)
UBAP2LUbiquitin associated protein 2 like. (1137 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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