STRINGSTRING
SNU13 SNU13 XRCC5 XRCC5 TBL3 TBL3 TSR1 TSR1 A0A287AJR4_PIG A0A287AJR4_PIG A0A286ZLE8_PIG A0A286ZLE8_PIG RRP9 RRP9 BMS1 BMS1 ISG20 ISG20 UTP25 UTP25 PRKDC PRKDC DHX37 DHX37
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
XRCC5X-ray repair cross complementing 5. (1011 aa)
TBL3Transducin beta like 3. (889 aa)
TSR1TSR1 ribosome maturation factor. (763 aa)
A0A287AJR4_PIGRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
A0A286ZLE8_PIGRibosomal_L7Ae domain-containing protein. (74 aa)
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
BMS1BMS1 ribosome biogenesis factor. (1284 aa)
ISG20Interferon stimulated exonuclease gene 20. (189 aa)
UTP25UTP25 small subunit processor component. (760 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4136 aa)
DHX37DEAH-box helicase 37. (1186 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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