STRINGSTRING
MAP1LC3C MAP1LC3C CNOT7 CNOT7 DHX30 DHX30 STAU2 STAU2 CLOCK CLOCK KIAA0355 KIAA0355 PIWIL4 PIWIL4 TNRC6C TNRC6C TNRC6A TNRC6A LARP1B LARP1B EIF2S1 EIF2S1 C19orf54 C19orf54 EIF4ENIF1 EIF4ENIF1 ACTB ACTB HNRNPU HNRNPU VCP VCP POLI POLI G3BP1 G3BP1 HSF1 HSF1 AGO1 AGO1 GIGYF2 GIGYF2 STAU1 STAU1 TIAL1 TIAL1 A0A286ZN96_PIG A0A286ZN96_PIG A0A286ZLJ2_PIG A0A286ZLJ2_PIG A0A286ZLG7_PIG A0A286ZLG7_PIG LSM6 LSM6 ATXN2 ATXN2 YTHDF1 YTHDF1 FMR1 FMR1 LARP4 LARP4 SAMD4B SAMD4B DHX9 DHX9 IGF2BP2 IGF2BP2 UPF2 UPF2 EIF4E EIF4E PABPC1 PABPC1 TIA1 TIA1 DHX36 DHX36 NOCT NOCT SNRPG SNRPG SOCS1 SOCS1 TDRD1 TDRD1 CNOT1 CNOT1 DCP1A DCP1A FXR1 FXR1 PCBP1 PCBP1 DCP1B DCP1B ZFP36 ZFP36 PIWIL2 PIWIL2 LOC100624590 LOC100624590 SLC39A2 SLC39A2 DDX28 DDX28 I3LAM0_PIG I3LAM0_PIG ZFAND1 ZFAND1 IGF2BP1 IGF2BP1 RPTOR RPTOR TDRD6 TDRD6 ZNFX1 ZNFX1 FXR2 FXR2 NUFIP2 NUFIP2 RNF135 RNF135 GRB7 GRB7 CASC3 CASC3 LARP1 LARP1 SMN1 SMN1 TBRG4 TBRG4 ASZ1 ASZ1 FASTKD2 FASTKD2 HOXD10 HOXD10 F1SF34_PIG F1SF34_PIG TDRD5 TDRD5 PSMC2 PSMC2 RPUSD4 RPUSD4 DCPS DCPS DDX25 DDX25 TRIM21 TRIM21 DCP2 DCP2 NANOS3 NANOS3 ELAVL1 ELAVL1 TUBB4A TUBB4A SHD SHD BTBD2 BTBD2 ZC3H12B ZC3H12B DDX3X DDX3X RPUSD3 RPUSD3 LIMD1 LIMD1 INA INA PIWIL3 PIWIL3 PIWIL1 PIWIL1 LIG4 LIG4 PAN3 PAN3 GRSF1 GRSF1 F1RWB7_PIG F1RWB7_PIG DDX1 DDX1 MCRIP2 MCRIP2 PABPC1L PABPC1L HAX1 HAX1 SHE SHE MEX3A MEX3A CDK9 CDK9 SHB SHB ZC3H12D ZC3H12D NANOS2 NANOS2 SYMPK SYMPK EDC4 EDC4 TDRD9 TDRD9 EDC3 EDC3 IQGAP1 IQGAP1 BTBD1 BTBD1 CTSH CTSH SERPINB1 SERPINB1 APOBEC3B APOBEC3B DDX19A DDX19A LSM3 LSM3 USP3 USP3 CNOT9 CNOT9 TDRKH TDRKH MCRIP1 MCRIP1 FASTKD5 FASTKD5 NFKBIZ NFKBIZ MCC MCC MOV10L1 MOV10L1 A0A5G2QZE0_PIG A0A5G2QZE0_PIG SAMD4A SAMD4A POLDIP3 POLDIP3 POLR2G POLR2G KPNB1 KPNB1 A0A5G2QWB6_PIG A0A5G2QWB6_PIG YBX1 YBX1 RBFOX1 RBFOX1 AICDA AICDA TRIM25 TRIM25 ICOSLG ICOSLG LSM14A LSM14A UHMK1 UHMK1 YTHDF2 YTHDF2 PSMA4 PSMA4 PMS2 PMS2 CNOT8 CNOT8 LSM4 LSM4 ROCK1 ROCK1 DDX4 DDX4 A0A5G2QHJ7_PIG A0A5G2QHJ7_PIG NYNRIN NYNRIN KHSRP KHSRP LARP4B LARP4B LOC100738935 LOC100738935 NSUN2 NSUN2 MAEL MAEL AJUBA AJUBA RBPMS RBPMS ZFP36L1 ZFP36L1 AGO2 AGO2 MARCKS MARCKS PABPC4 PABPC4 TNRC6B TNRC6B RC3H2 RC3H2 LOC100737265 LOC100737265 CARHSP1 CARHSP1 PABPC4L PABPC4L SQSTM1 SQSTM1 DIS3L2 DIS3L2 DYRK3 DYRK3 CAPRIN1 CAPRIN1 PRKAA2 PRKAA2 AGO4 AGO4 G3BP2 G3BP2 ZC3H12A ZC3H12A TDRD10 TDRD10 SNCAIP SNCAIP RPL6 RPL6 MEX3B MEX3B TUBA1A TUBA1A LSM2 LSM2 SMG1 SMG1 HELZ HELZ MOV10 MOV10 TRUB2 TRUB2 C9orf72 C9orf72 SHFL SHFL TRIM71 TRIM71 ARC ARC PABPC5 PABPC5 A0A287B019_PIG A0A287B019_PIG MYH1 MYH1 FASTKD3 FASTKD3 DYNC1I1 DYNC1I1 CNOT2 CNOT2 LSM1 LSM1 A0A287AX99_PIG A0A287AX99_PIG YTHDF3 YTHDF3 FASTK FASTK ZC3H12C ZC3H12C PQBP1 PQBP1 CHTOP CHTOP PATL1 PATL1 WTIP WTIP KHNYN KHNYN DDX6 DDX6 HABP4 HABP4 IGF2BP3 IGF2BP3 GABPB1 GABPB1 GHR GHR FASTKD1 FASTKD1 ATXN2L ATXN2L MBNL1 MBNL1 PUM2 PUM2 OGFOD1 OGFOD1 CNOT3 CNOT3 RC3H1 RC3H1 PUM1 PUM1 PAN2 PAN2 SNRPB2 SNRPB2 CT55 CT55
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (147 aa)
CNOT7CCR4-NOT transcription complex subunit 7 isoform 1. (285 aa)
DHX30DExH-box helicase 30. (1194 aa)
STAU2Staufen double-stranded RNA binding protein 2. (632 aa)
CLOCKClock circadian regulator. (857 aa)
KIAA0355KIAA0355. (1074 aa)
PIWIL4Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family. (906 aa)
TNRC6CTrinucleotide repeat containing adaptor 6C. (1932 aa)
TNRC6ATrinucleotide repeat containing adaptor 6A. (1989 aa)
LARP1BLa ribonucleoprotein domain family member 1B. (1116 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] (315 aa)
C19orf54Chromosome 19 open reading frame 54. (366 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (984 aa)
ACTBActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform a. (825 aa)
VCPTransitional endoplasmic reticulum ATPase; Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1, VCP and NPLOC4 binds ubiquitinated proteins and is neces [...] (878 aa)
POLIDNA polymerase iota isoform a (Long). (750 aa)
G3BP1G3BP stress granule assembly factor 1. (495 aa)
HSF1Heat shock transcription factor 1. (590 aa)
AGO1Argonaute RISC component 1; Belongs to the argonaute family. (1168 aa)
GIGYF2GRB10 interacting GYF protein 2. (1310 aa)
STAU1Staufen double-stranded RNA binding protein 1. (687 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (395 aa)
A0A286ZN96_PIGRRM domain-containing protein. (90 aa)
A0A286ZLJ2_PIGUncharacterized protein. (178 aa)
A0A286ZLG7_PIGUncharacterized protein. (135 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (124 aa)
ATXN2Ataxin 2. (1335 aa)
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (652 aa)
FMR1Fragile X mental retardation protein 1. (632 aa)
LARP4La ribonucleoprotein domain family member 4. (821 aa)
SAMD4BSterile alpha motif domain containing 4B. (827 aa)
DHX9ATP-dependent RNA helicase A. (1384 aa)
IGF2BP2Insulin like growth factor 2 mRNA binding protein 2. (592 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1270 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (237 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
DHX36DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1. (1012 aa)
NOCTNocturnin. (427 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SOCS1Suppressor of cytokine signaling 1. (220 aa)
TDRD1Tudor domain containing 1. (1177 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2343 aa)
DCP1AmRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family. (580 aa)
FXR1Fragile X mental retardation syndrome-related protein 1 isoform X1. (677 aa)
PCBP1Poly(rC) binding protein 1. (356 aa)
DCP1BDecapping mRNA 1B. (559 aa)
ZFP36Uncharacterized protein. (372 aa)
PIWIL2Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family. (985 aa)
LOC100624590ATP-dependent RNA helicase DDX3X isoform 2; Belongs to the DEAD box helicase family. (670 aa)
SLC39A2Solute carrier family 39 member 2. (309 aa)
DDX28DEAD-box helicase 28. (540 aa)
I3LAM0_PIGUncharacterized protein. (600 aa)
ZFAND1AN1-type zinc finger protein 1 isoform a. (268 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)
RPTORRegulatory associated protein of MTOR complex 1. (1351 aa)
TDRD6Tudor domain containing 6. (2113 aa)
ZNFX1Zinc finger NFX1-type containing 1. (1926 aa)
FXR2FMR1 autosomal homolog 2. (667 aa)
NUFIP2Nuclear FMR1 interacting protein 2. (705 aa)
RNF135E3 ubiquitin-protein ligase RNF135 isoform 1. (423 aa)
GRB7Growth factor receptor bound protein 7. (569 aa)
CASC3CASC3 exon junction complex subunit. (633 aa)
LARP1La ribonucleoprotein domain family member 1. (1101 aa)
SMN1Tudor domain-containing protein. (381 aa)
TBRG4FAST kinase domain-containing protein 4; Plays a role in processing of mitochondrial RNA precursors and in stabilization of a subset of mature mitochondrial RNA species, such as MT-CO1, MT-CO2, MT-CYB, MT-CO3, MT-ND3, MT-ND5 and MT-ATP8/6. May play a role in cell cycle progression. (632 aa)
ASZ1Ankyrin repeat, SAM and basic leucine zipper domain containing 1. (477 aa)
FASTKD2FAST kinase domain-containing protein 2, mitochondrial. (689 aa)
HOXD10Homeobox protein Hox-D10. (410 aa)
F1SF34_PIGRRM domain-containing protein. (170 aa)
TDRD5Tudor domain containing 5. (974 aa)
PSMC2AAA domain-containing protein; Belongs to the AAA ATPase family. (433 aa)
RPUSD4RNA pseudouridylate synthase domain-containing protein 4. (376 aa)
DCPSm7GpppX diphosphatase; Decapping scavenger enzyme that catalyzes the cleavage of a residual cap structure following the degradation of mRNAs by the 3'->5' exosome-mediated mRNA decay pathway. Hydrolyzes cap analog structures like 7-methylguanosine nucleoside triphosphate (m7GpppG) with up to 10 nucleotide substrates (small capped oligoribonucleotides) and specifically releases 5'-phosphorylated RNA fragments and 7- methylguanosine monophosphate (m7GMP). Cleaves cap analog structures like tri-methyl guanosine nucleoside triphosphate (m3(2,2,7)GpppG) with very poor efficiency. Does not h [...] (337 aa)
DDX25ATP-dependent RNA helicase DDX25 isoform 1. (483 aa)
TRIM21Tripartite motif containing 21. (474 aa)
DCP2Decapping mRNA 2. (478 aa)
NANOS3Nanos C2HC-type zinc finger 3; Belongs to the nanos family. (261 aa)
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)
TUBB4ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity). Belongs to the tubulin family. (443 aa)
SHDSrc homology 2 domain containing transforming protein D. (340 aa)
BTBD2BTB/POZ domain-containing protein 2. (515 aa)
ZC3H12BZinc finger CCCH-type containing 12B. (836 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform 1; Belongs to the DEAD box helicase family. (662 aa)
RPUSD3Mitochondrial mRNA pseudouridine synthase RPUSD3 isoform 1. (352 aa)
LIMD1LIM domain-containing protein 1. (671 aa)
INAInternexin neuronal intermediate filament protein alpha; Belongs to the intermediate filament family. (499 aa)
PIWIL3Uncharacterized protein; Belongs to the argonaute family. (790 aa)
PIWIL1Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family. (861 aa)
LIG4DNA ligase. (910 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (906 aa)
GRSF1G-rich RNA sequence binding factor 1. (621 aa)
F1RWB7_PIGCSD_1 domain-containing protein. (264 aa)
DDX1DEAD-box helicase 1. (741 aa)
MCRIP2MAPK regulated corepressor interacting protein 2. (156 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (610 aa)
HAX1HCLS1-associated protein X-1; Recruits the Arp2/3 complex to the cell cortex and regulates reorganization of the cortical actin cytoskeleton via its interaction with KCNC3 and the Arp2/3 complex. Slows down the rate of inactivation of KCNC3 channels. Promotes GNA13-mediated cell migration. Involved in the clathrin-mediated endocytosis pathway. May be involved in internalization of ABC transporters such as ABCB11. May inhibit CASP9 and CASP3. Promotes cell survival. May regulate intracellular calcium pools; Belongs to the HAX1 family. (284 aa)
SHESH2 domain-containing adapter protein E isoform X1. (506 aa)
MEX3AMex-3 RNA binding family member A. (519 aa)
CDK9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (488 aa)
SHBSH2 domain-containing protein. (507 aa)
ZC3H12DZinc finger CCCH-type containing 12D. (507 aa)
NANOS2Nanos C2HC-type zinc finger 2; Belongs to the nanos family. (138 aa)
SYMPKSymplekin. (1271 aa)
EDC4Enhancer of mRNA decapping 4. (1402 aa)
TDRD9Tudor domain containing 9. (1389 aa)
EDC3Enhancer of mRNA decapping 3. (508 aa)
IQGAP1IQ motif containing GTPase activating protein 1. (1709 aa)
BTBD1BTB/POZ domain-containing protein 1 isoform 1. (484 aa)
CTSHCathepsin H heavy chain; Important for the overall degradation of proteins in lysosomes; Belongs to the peptidase C1 family. (335 aa)
SERPINB1Leukocyte elastase inhibitor; Neutrophil serine protease inhibitor that plays an essential role in the regulation of the innate immune response, inflammation and cellular homeostasis. Acts primarily to protect the cell from proteases released in the cytoplasm during stress or infection. These proteases are important in killing microbes but when released from granules, these potent enzymes also destroy host proteins and contribute to mortality. Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Acts also as a [...] (413 aa)
APOBEC3BUncharacterized protein. (418 aa)
DDX19ADEAD-box helicase 19B. (484 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (105 aa)
USP3Ubiquitinyl hydrolase 1. (540 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (300 aa)
TDRKHTudor and KH domain containing. (611 aa)
MCRIP1MAPK regulated corepressor interacting protein 1. (123 aa)
FASTKD5FAST kinase domains 5. (813 aa)
NFKBIZNFKB inhibitor zeta. (747 aa)
MCCMCC regulator of WNT signaling pathway. (982 aa)
MOV10L1AAA_12 domain-containing protein. (119 aa)
A0A5G2QZE0_PIGUncharacterized protein. (239 aa)
SAMD4ASterile alpha motif domain containing 4A. (718 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (420 aa)
POLR2GRNA polymerase II subunit G. (231 aa)
KPNB1Karyopherin subunit beta 1. (877 aa)
A0A5G2QWB6_PIGUncharacterized protein. (979 aa)
YBX1Y-box binding protein 1. (419 aa)
RBFOX1RNA binding fox-1 homolog 1. (577 aa)
AICDAActivation induced cytidine deaminase. (224 aa)
TRIM25Tripartite motif containing 25. (633 aa)
ICOSLGIg-like domain-containing protein. (483 aa)
LSM14AUncharacterized protein. (475 aa)
UHMK1Serine/threonine-protein kinase Kist isoform 1. (419 aa)
YTHDF2YTH N6-methyladenosine RNA binding protein 2. (600 aa)
PSMA4Proteasome subunit alpha type. (281 aa)
PMS2PMS1 homolog 2, mismatch repair system component. (864 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (312 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (234 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
DDX4Probable ATP-dependent RNA helicase DDX4; ATP-dependent RNA helicase required during spermatogenesis to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Involved in the secondary piRNAs metabolic process, the production of piRNAs in fetal male germ cells through a ping-pong amplification cycl [...] (744 aa)
A0A5G2QHJ7_PIGUncharacterized protein. (148 aa)
NYNRINNYN domain and retroviral integrase containing. (1900 aa)
KHSRPKH-type splicing regulatory protein. (784 aa)
LARP4BHTH La-type RNA-binding domain-containing protein. (1587 aa)
LOC100738935Uncharacterized protein. (415 aa)
NSUN2NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (992 aa)
MAELProtein maelstrom homolog; Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with piP-bodies suggests a participation in the secondary piRNAs metabolic process. Required for the localization of germ-cell factors to the meiotic n [...] (477 aa)
AJUBAAjuba LIM protein. (565 aa)
RBPMSRNA binding protein, mRNA processing factor. (223 aa)
ZFP36L1ZFP36 ring finger protein like 1. (348 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (874 aa)
MARCKSMyristoylated alanine rich protein kinase C substrate. (332 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
TNRC6BTrinucleotide repeat containing adaptor 6B. (1868 aa)
RC3H2Ring finger and CCCH-type domains 2. (1192 aa)
LOC100737265Small ubiquitin-related modifier 1; Ubiquitin-like protein that can be covalently attached to proteins as a monomer or a lysine-linked polymer. Covalent attachment via an isopeptide bond to its substrates requires prior activation by the E1 complex SAE1-SAE2 and linkage to the E2 enzyme UBE2I, and can be promoted by E3 ligases such as PIAS1-4, RANBP2 or CBX4. This post- translational modification on lysine residues of proteins plays a crucial role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Involved for insta [...] (101 aa)
CARHSP1Calcium regulated heat stable protein 1. (146 aa)
PABPC4LPoly(A) binding protein cytoplasmic 4 like. (341 aa)
SQSTM1Sequestosome 1. (451 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase, such as ZCCHC11/TUT4. Mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. Mediates degradation of uridylated pre-let-7 miRNAs, contributing to the maintenance of embryonic stem (ES) cells. Essential for correct mi [...] (914 aa)
DYRK3Dual specificity tyrosine phosphorylation regulated kinase 3. (545 aa)
CAPRIN1Cell cycle associated protein 1. (709 aa)
PRKAA25'-AMP-activated protein kinase catalytic subunit alpha-2; Catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Also acts a [...] (552 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (878 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (481 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (582 aa)
TDRD10RRM domain-containing protein. (387 aa)
SNCAIPUncharacterized protein. (62 aa)
RPL660S ribosomal protein L6; Component of the large ribosomal subunit. (271 aa)
MEX3BMex-3 RNA binding family member B. (576 aa)
TUBA1ADetyrosinated tubulin alpha-1B chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3646 aa)
HELZPutative helicase with zinc finger domain isoform X1. (1915 aa)
MOV10Mov10 RISC complex RNA helicase. (1093 aa)
TRUB2Mitochondrial mRNA pseudouridine synthase TRUB2 isoform 1. (349 aa)
C9orf72C9orf72-SMCR8 complex subunit. (489 aa)
SHFLUncharacterized protein. (286 aa)
TRIM71E3 ubiquitin-protein ligase TRIM71. (869 aa)
ARCActivity regulated cytoskeleton associated protein. (396 aa)
PABPC5Poly(A) binding protein cytoplasmic 5. (382 aa)
A0A287B019_PIGRRM domain-containing protein. (135 aa)
MYH1Myosin-2; Muscle contraction. Required for cytoskeleton organization (By similarity). (1956 aa)
FASTKD3FAST kinase domains 3. (662 aa)
DYNC1I1Cytoplasmic dynein 1 intermediate chain 1 isoform X1. (645 aa)
CNOT2NOT2_3_5 domain-containing protein. (578 aa)
LSM1Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone (By similarity). (302 aa)
A0A287AX99_PIGUncharacterized protein. (73 aa)
YTHDF3YTH domain-containing family protein 3 isoform b. (588 aa)
FASTKFas activated serine/threonine kinase. (668 aa)
ZC3H12CPutative ribonuclease ZC3H12C isoform X1. (885 aa)
PQBP1Polyglutamine binding protein 1. (265 aa)
CHTOPChromatin target of PRMT1. (277 aa)
PATL1PAT1 homolog 1, processing body mRNA decay factor. (786 aa)
WTIPWT1 interacting protein. (434 aa)
KHNYNKH and NYN domain containing. (663 aa)
DDX6Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family. (483 aa)
HABP4Intracellular hyaluronan-binding protein 4. (418 aa)
IGF2BP3Insulin-like growth factor 2 mRNA-binding protein 3. (586 aa)
GABPB1GA binding protein transcription factor subunit beta 1. (360 aa)
GHRGrowth hormone-binding protein; Receptor for pituitary gland growth hormone involved in regulating postnatal body growth. On ligand binding, couples to, and activates the JAK2/STAT5 pathway. (660 aa)
FASTKD1FAST kinase domains 1. (791 aa)
ATXN2LAtaxin 2 like. (1080 aa)
MBNL1Muscleblind like splicing regulator 1. (436 aa)
PUM2Pumilio RNA binding family member 2. (1072 aa)
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (560 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (774 aa)
RC3H1Ring finger and CCCH-type domains 1. (1132 aa)
PUM1Pumilio RNA binding family member 1. (1189 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1198 aa)
SNRPB2RU2B. (225 aa)
CT55S1-like domain-containing protein. (254 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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