22 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZFP36	Uncharacterized protein. (372 aa)
	ELAVL3	ELAV-like protein; Belongs to the RRM elav family. (367 aa)
	ELAVL1	ELAV-like protein; Belongs to the RRM elav family. (326 aa)
	RBMS3	RNA binding motif single stranded interacting protein 3. (458 aa)
	EXOSC4	Exosome complex component RRP41. (245 aa)
	APOBEC1	Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (236 aa)
	DHX36	DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1. (1012 aa)
	ZFP36L2	ZFP36 ring finger protein like 2. (564 aa)
	HNRNPA0	Heterogeneous nuclear ribonucleoprotein A0. (302 aa)
	A0A5G2QKX6_PIG	CPSF_A domain-containing protein. (200 aa)
	NUDT21	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (237 aa)
	EXOSC8	Exosome component 8. (281 aa)
	TIA1	TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
	ILF3	Interleukin enhancer binding factor 3. (889 aa)
	A0A286ZLG7_PIG	Uncharacterized protein. (135 aa)
	EXOSC9	Exosome component 9. (455 aa)
	RBM24	RRM domain-containing protein. (528 aa)
	A0A287B578_PIG	Uncharacterized protein. (103 aa)
	ELAVL4	ELAV-like protein; Belongs to the RRM elav family. (487 aa)
	ZC3H12A	Zinc finger CCCH-type containing 12A. (582 aa)
	ZFP36L1	ZFP36 ring finger protein like 1. (348 aa)
	MEX3D	RNA-binding protein MEX3D isoform 1. (649 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287B578_PIG	NUDT21	ENSSSCP00000051248	ENSSSCP00000064831	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.546
A0A5G2QKX6_PIG	NUDT21	ENSSSCP00000065195	ENSSSCP00000064831	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.438
A0A5G2QKX6_PIG	TIA1	ENSSSCP00000065195	ENSSSCP00000026866	CPSF_A domain-containing protein.	TIA1 cytotoxic granule associated RNA binding protein.	0.504
DHX36	ELAVL3	ENSSSCP00000026838	ENSSSCP00000014471	DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1.	ELAV-like protein; Belongs to the RRM elav family.	0.585
DHX36	ELAVL4	ENSSSCP00000026838	ENSSSCP00000054711	DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1.	ELAV-like protein; Belongs to the RRM elav family.	0.586
ELAVL1	HNRNPA0	ENSSSCP00000014443	ENSSSCP00000067875	ELAV-like protein; Belongs to the RRM elav family.	Heterogeneous nuclear ribonucleoprotein A0.	0.455
ELAVL1	ILF3	ENSSSCP00000014443	ENSSSCP00000028612	ELAV-like protein; Belongs to the RRM elav family.	Interleukin enhancer binding factor 3.	0.680
ELAVL1	NUDT21	ENSSSCP00000014443	ENSSSCP00000064831	ELAV-like protein; Belongs to the RRM elav family.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.511
ELAVL1	TIA1	ENSSSCP00000014443	ENSSSCP00000026866	ELAV-like protein; Belongs to the RRM elav family.	TIA1 cytotoxic granule associated RNA binding protein.	0.604
ELAVL3	DHX36	ENSSSCP00000014471	ENSSSCP00000026838	ELAV-like protein; Belongs to the RRM elav family.	DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1.	0.585
ELAVL3	ELAVL4	ENSSSCP00000014471	ENSSSCP00000054711	ELAV-like protein; Belongs to the RRM elav family.	ELAV-like protein; Belongs to the RRM elav family.	0.567
ELAVL3	RBM24	ENSSSCP00000014471	ENSSSCP00000035066	ELAV-like protein; Belongs to the RRM elav family.	RRM domain-containing protein.	0.572
ELAVL4	DHX36	ENSSSCP00000054711	ENSSSCP00000026838	ELAV-like protein; Belongs to the RRM elav family.	DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1.	0.586
ELAVL4	ELAVL3	ENSSSCP00000054711	ENSSSCP00000014471	ELAV-like protein; Belongs to the RRM elav family.	ELAV-like protein; Belongs to the RRM elav family.	0.567
EXOSC4	EXOSC8	ENSSSCP00000006334	ENSSSCP00000060162	Exosome complex component RRP41.	Exosome component 8.	0.998
EXOSC4	EXOSC9	ENSSSCP00000006334	ENSSSCP00000034219	Exosome complex component RRP41.	Exosome component 9.	0.997
EXOSC4	ZFP36	ENSSSCP00000006334	ENSSSCP00000022373	Exosome complex component RRP41.	Uncharacterized protein.	0.530
EXOSC4	ZFP36L1	ENSSSCP00000006334	ENSSSCP00000060036	Exosome complex component RRP41.	ZFP36 ring finger protein like 1.	0.530
EXOSC8	EXOSC4	ENSSSCP00000060162	ENSSSCP00000006334	Exosome component 8.	Exosome complex component RRP41.	0.998
EXOSC8	EXOSC9	ENSSSCP00000060162	ENSSSCP00000034219	Exosome component 8.	Exosome component 9.	0.995