STRINGSTRING
PTK7 PTK7 CAMSAP3 CAMSAP3 SH3BP1 SH3BP1 IFT20 IFT20 CDC42 CDC42 TCF15 TCF15 WNT5A WNT5A MYO9A MYO9A FOXF1 FOXF1 MSN MSN RHOA RHOA TTC8 TTC8 SYNE4 SYNE4 SLC9A3R1 SLC9A3R1 OPHN1 OPHN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1070 aa)
CAMSAP3Calmodulin regulated spectrin associated protein family member 3. (1271 aa)
SH3BP1Uncharacterized protein. (643 aa)
IFT20Intraflagellar transport protein 20 homolog isoform X1. (158 aa)
CDC42Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] (197 aa)
TCF15Transcription factor 15. (197 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
MYO9AMyosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2647 aa)
FOXF1Forkhead box protein F1. (423 aa)
MSNMoesin; Probably involved in connections of major cytoskeletal structures to the plasma membrane. Plays a role in regulating the proliferation, migration, and adhesion of human lymphoid cells and participates in immunologic synapse formation. (612 aa)
RHOATransforming protein RhoA isoform 1. (193 aa)
TTC8Tetratricopeptide repeat domain 8. (587 aa)
SYNE4Spectrin repeat containing nuclear envelope family member 4. (339 aa)
SLC9A3R1Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (365 aa)
OPHN1Oligophrenin 1. (808 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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