STRINGSTRING
VDR VDR KRT84 KRT84 KDF1 KDF1 HEY2 HEY2 BMP4 BMP4 PRKCH PRKCH NCOA3 NCOA3 ATOH1 ATOH1 ZBED2 ZBED2 ETV4 ETV4 MED1 MED1 ALOX15B ALOX15B SGPP1 SGPP1 MAFF MAFF HOXA7 HOXA7 DLL1 DLL1 ZFP36 ZFP36 CYP27B1 CYP27B1 PTCH1 PTCH1 CD109 CD109 SFRP4 SFRP4 ERRFI1 ERRFI1 PTCH2 PTCH2 MACROH2A2 MACROH2A2 HES1 HES1 EZH2 EZH2 NOTCH1 NOTCH1 MAFG MAFG HES5 HES5 MYCL MYCL FGF2 FGF2 KEAP1 KEAP1 NUMA1 NUMA1 ABCA12 ABCA12 TRIM16 TRIM16 ZFP36L1 ZFP36L1 ROCK1 ROCK1 MACROH2A1 MACROH2A1 TP63 TP63 KLF7 KLF7 KRT36 KRT36 GRHL2 GRHL2 GRHL1 GRHL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDRVitamin D3 receptor; Nuclear receptor for calcitriol, the active form of vitamin D3 which mediates the action of this vitamin on cells (By similarity). Enters the nucleus upon vitamin D3 binding where it forms heterodimers with the retinoid X receptor/RXR (By similarity). The VDR-RXR heterodimers bind to specific response elements on DNA and activate the transcription of vitamin D3-responsive target genes (By similarity). Plays a central role in calcium homeostasis (By similarity). (520 aa)
KRT84Keratin 84; Belongs to the intermediate filament family. (593 aa)
KDF1Keratinocyte differentiation factor 1. (398 aa)
HEY2Hes related family bHLH transcription factor with YRPW motif 2. (337 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
PRKCHProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (522 aa)
NCOA3Uncharacterized protein. (1296 aa)
ATOH1Atonal bHLH transcription factor 1. (353 aa)
ZBED2Zinc finger BED domain-containing protein 2. (217 aa)
ETV4ETS variant 4. (485 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1517 aa)
ALOX15BArachidonate 15-lipoxygenase type B. (718 aa)
SGPP1Sphingosine-1-phosphate phosphatase 1. (443 aa)
MAFFMAF bZIP transcription factor F. (166 aa)
HOXA7Homeobox A7. (234 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (729 aa)
ZFP36Uncharacterized protein. (372 aa)
CYP27B1Cytochrome P450 family 27 subfamily B member 1; Belongs to the cytochrome P450 family. (500 aa)
PTCH1Protein patched homolog 1 isoform L. (1452 aa)
CD109CD109 antigen isoform 1 preproprotein. (1449 aa)
SFRP4Secreted frizzled-related protein 4. (346 aa)
ERRFI1ERBB receptor feedback inhibitor 1. (461 aa)
PTCH2Patched 2. (1207 aa)
MACROH2A2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
HES1Uncharacterized protein. (280 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (762 aa)
NOTCH1Neurogenic locus notch homolog protein 1 preproprotein. (2560 aa)
MAFGMAF bZIP transcription factor G. (162 aa)
HES5Hes family bHLH transcription factor 5. (226 aa)
MYCLMYCL proto-oncogene, bHLH transcription factor. (364 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (316 aa)
KEAP1Kelch-like ECH-associated protein 1; Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that regulates the response to oxidative stress by targeting NFE2L2/NRF2 for ubiquitination. KEAP1 acts as a key sensor of oxidative and electrophilic stress: in normal conditions, the BCR(KEAP1) complex mediates ubiquitination and degradation of NFE2L2/NRF2, a transcription factor regulating expression of many cytoprotective genes. In response to oxidative stress, different electrophile metabolites trigger non-enzymatic covalent modifications of highly reactive cysteine [...] (624 aa)
NUMA1Nuclear mitotic apparatus protein 1. (2134 aa)
ABCA12ATP binding cassette subfamily A member 12. (2593 aa)
TRIM16Uncharacterized protein. (582 aa)
ZFP36L1ZFP36 ring finger protein like 1. (348 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
TP63Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. (680 aa)
KLF7Kruppel like factor 7. (302 aa)
KRT36Keratin 36; Belongs to the intermediate filament family. (459 aa)
GRHL2Grainyhead like transcription factor 2. (626 aa)
GRHL1Grainyhead like transcription factor 1. (649 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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