STRINGSTRING
SEMA3F SEMA3F SLIT1 SLIT1 VCL VCL EDNRA EDNRA SLIT2 SLIT2 EMX1 EMX1 EXT1 EXT1 PAK6 PAK6 LPAR3 LPAR3 DVL1 DVL1 IQGAP1 IQGAP1 SRF SRF RYK RYK APP APP STK11 STK11 GDF9 GDF9 CDKL3 CDKL3 POU4F3 POU4F3 F1SF13_PIG F1SF13_PIG RAPH1 RAPH1 SLIT3 SLIT3 SOX9 SOX9 POU4F2 POU4F2 SEMA7A SEMA7A SPG11 SPG11 CDH4 CDH4 LOC100625207 LOC100625207 NRN1L NRN1L I3LSZ9_PIG I3LSZ9_PIG PRKCZ PRKCZ PLXNA3 PLXNA3 DCX DCX FLRT3 FLRT3 ALCAM ALCAM ITGB1 ITGB1 DDR1 DDR1 A0A286ZJP8_PIG A0A286ZJP8_PIG CTNNB1 CTNNB1 JADE2 JADE2 A0A286ZKY5_PIG A0A286ZKY5_PIG DCLK1 DCLK1 RARG RARG MEX3C MEX3C EFNA5 EFNA5 LHX2 LHX2 WNT5A WNT5A EDN2 EDN2 PLXNA1 PLXNA1 USP9X USP9X LOC110256054 LOC110256054 EDN1 EDN1 SSNA1 SSNA1 WASF1 WASF1 BDNF BDNF ADRA1A ADRA1A CYFIP2 CYFIP2 LAMB2 LAMB2 NDN NDN NIN NIN NRP2 NRP2 SEMA5B SEMA5B C9orf72 C9orf72 ULK1 ULK1 ARIH2 ARIH2 NDEL1 NDEL1 LLPH LLPH TNN TNN IST1 IST1 MAP1B MAP1B SPART SPART A0A287BNW8_PIG A0A287BNW8_PIG HDAC6 HDAC6 SEMA5A SEMA5A TNR TNR AUTS2 AUTS2 LIMK1 LIMK1 SPAG6 SPAG6 NRN1 NRN1 TMEM108 TMEM108
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEMA3FSemaphorin 3F; Belongs to the semaphorin family. (777 aa)
SLIT1Slit guidance ligand 1. (1534 aa)
VCLVinculin; Actin filament (F-actin)-binding protein involved in cell- matrix adhesion and cell-cell adhesion. Regulates cell-surface E- cadherin expression and potentiates mechanosensing by the E-cadherin complex. May also play important roles in cell morphology and locomotion; Belongs to the vinculin/alpha-catenin family. (1135 aa)
EDNRAEndothelin-1 receptor; Receptor for endothelin-1. Mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. The rank order of binding affinities for ET-A is: ET1 > ET2 >> ET3 (By similarity). (427 aa)
SLIT2Slit guidance ligand 2. (1542 aa)
EMX1Empty spiracles homeobox 1. (288 aa)
EXT1Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family. (746 aa)
PAK6Non-specific serine/threonine protein kinase. (709 aa)
LPAR3Lysophosphatidic acid receptor 3 isoform X1; Belongs to the G-protein coupled receptor 1 family. (354 aa)
DVL1Dishevelled segment polarity protein 1. (700 aa)
IQGAP1IQ motif containing GTPase activating protein 1. (1709 aa)
SRFSerum response factor. (512 aa)
RYKReceptor like tyrosine kinase. (566 aa)
APPGamma-secretase C-terminal fragment 50; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...] (756 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
GDF9Growth differentiation factor 9. (444 aa)
CDKL3Cyclin dependent kinase like 3. (617 aa)
POU4F3POU domain protein. (338 aa)
F1SF13_PIGCobl domain-containing protein. (406 aa)
RAPH1Uncharacterized protein. (620 aa)
SLIT3Slit guidance ligand 3. (1523 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
POU4F2POU domain protein. (408 aa)
SEMA7ASemaphorin 7A (John Milton Hagen blood group); Belongs to the semaphorin family. (615 aa)
SPG11SPG11 vesicle trafficking associated, spatacsin. (2467 aa)
CDH4Cadherin 4; Cadherins are calcium-dependent cell adhesion proteins. (914 aa)
LOC100625207USP domain-containing protein; Belongs to the peptidase C19 family. (2554 aa)
NRN1LNeuritin 1 like. (173 aa)
I3LSZ9_PIGUncharacterized protein. (169 aa)
PRKCZProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (629 aa)
PLXNA3Plexin A3. (1871 aa)
DCXDoublecortin. (365 aa)
FLRT3Fibronectin leucine rich transmembrane protein 3. (649 aa)
ALCAMActivated leukocyte cell adhesion molecule. (619 aa)
ITGB1Integrin beta-1; Integrins alpha-1/beta-1, alpha-2/beta-1, alpha-10/beta-1 and alpha-11/beta-1 are receptors for collagen. Integrins alpha-1/beta-1 and alpha-2/beta-2 recognize the proline-hydroxylated sequence G-F-P-G- E-R in collagen. Integrins alpha-2/beta-1, alpha-3/beta-1, alpha- 4/beta-1, alpha-5/beta-1, alpha-8/beta-1, alpha-10/beta-1, alpha- 11/beta-1 and alpha-V/beta-1 are receptors for fibronectin. Alpha- 4/beta-1 recognizes one or more domains within the alternatively spliced CS-1 and CS-5 regions of fibronectin. Integrin alpha-5/beta-1 is a receptor for fibrinogen. Integrin [...] (853 aa)
DDR1Tyrosine-protein kinase receptor. (1005 aa)
A0A286ZJP8_PIGUncharacterized protein. (82 aa)
CTNNB1Catenin beta 1. (808 aa)
JADE2Jade family PHD finger 2. (784 aa)
A0A286ZKY5_PIGUncharacterized protein. (73 aa)
DCLK1Doublecortin like kinase 1. (730 aa)
RARGRetinoic acid receptor gamma. (554 aa)
MEX3CRNA-binding E3 ubiquitin-protein ligase MEX3C. (655 aa)
EFNA5Ephrin A5; Belongs to the ephrin family. (228 aa)
LHX2LIM/homeobox protein Lhx2. (406 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
EDN2Endothelin 2. (180 aa)
PLXNA1Plexin A1. (1909 aa)
USP9XPutative ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4; Belongs to the peptidase C19 family. (2554 aa)
LOC110256054WH2 domain-containing protein. (558 aa)
EDN1Big endothelin-1; Endothelins are endothelium-derived vasoconstrictor peptides. Probable ligand for G-protein coupled receptors EDNRA and EDNRB which activates PTK2B, BCAR1, BCAR3 and, GTPases RAP1 and RHOA cascade in glomerular mesangial cells (By similarity). Belongs to the endothelin/sarafotoxin family. (203 aa)
SSNA1SS nuclear autoantigen 1. (119 aa)
WASF1WH2 domain-containing protein. (559 aa)
BDNFBrain-derived neurotrophic factor; Important signaling molecule that activates signaling cascades downstream of NTRK2 (By similarity). During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including lo [...] (260 aa)
ADRA1AAlpha-1A adrenergic receptor isoform 1. (466 aa)
CYFIP2Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1278 aa)
LAMB2Laminin subunit beta-2. (1881 aa)
NDNNecdin. (325 aa)
NINNinein. (2136 aa)
NRP2Neuropilin; Belongs to the neuropilin family. (920 aa)
SEMA5BSemaphorin 5B. (1126 aa)
C9orf72C9orf72-SMCR8 complex subunit. (489 aa)
ULK1Unc-51 like autophagy activating kinase 1. (1176 aa)
ARIH2RBR-type E3 ubiquitin transferase. (491 aa)
NDEL1NudE neurodevelopment protein 1 like 1. (394 aa)
LLPHLLP homolog, long-term synaptic facilitation factor. (127 aa)
TNNTenascin N. (1472 aa)
IST1IST1 factor associated with ESCRT-III. (401 aa)
MAP1BMicrotubule-associated protein 1B isoform 1. (2474 aa)
SPARTSpartin. (666 aa)
A0A287BNW8_PIGUncharacterized protein. (99 aa)
HDAC6Histone deacetylase 6. (1159 aa)
SEMA5ASemaphorin 5A. (1072 aa)
TNRTenascin R. (1270 aa)
AUTS2Uncharacterized protein. (1255 aa)
LIMK1LIM domain kinase 1. (681 aa)
SPAG6Uncharacterized protein. (537 aa)
NRN1Neuritin 1. (167 aa)
TMEM108Transmembrane protein 108. (575 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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