STRINGSTRING
PTCH1 PTCH1 BRCA2 BRCA2 A4GNT A4GNT PHB2 PHB2 WDR13 WDR13 ATP5IF1 ATP5IF1 GDF5 GDF5 SYNJ2BP SYNJ2BP IFT80 IFT80 NF1 NF1 CCL2 CCL2 NGFR NGFR MED1 MED1 SOX9 SOX9 CAV2 CAV2 TRIM24 TRIM24 COL4A3 COL4A3 AQP11 AQP11 MEF2C MEF2C STK11 STK11 TNMD TNMD AR AR MAGED1 MAGED1 IFT57 IFT57 GHRL GHRL DUSP10 DUSP10 CDC73 CDC73 GDF2 GDF2 CNMD CNMD RB1 RB1 SFRP2 SFRP2 XDH XDH ATOH8 ATOH8 WDR77 WDR77 SULF1 SULF1 DAB2IP DAB2IP CDKN2B CDKN2B IFT74 IFT74 BMP4 BMP4 THBS1 THBS1 KDF1 KDF1 APOE APOE MARVELD3 MARVELD3 VASH1 VASH1 NR2F2 NR2F2 TINF2 TINF2 NKX2-8 NKX2-8 PPARD PPARD ACVRL1 ACVRL1 WNT10B WNT10B CD109 CD109 APOH APOH ZEB1 ZEB1 SFRP1 SFRP1 GPC3 GPC3 FGFR2 FGFR2 TGFB1 TGFB1 ALOX5 ALOX5 CDK6 CDK6 TGFBR1 TGFBR1 DLG1 DLG1 SAV1 SAV1 CAV1 CAV1 KRIT1 KRIT1 PDCD10 PDCD10 LIMS2 LIMS2 PRL PRL STAT1 STAT1 P14ARF P14ARF NFIB NFIB KRT4 KRT4 PAX6 PAX6 TGFB2 TGFB2 PTPRM PTPRM SNAI2 SNAI2 WNT5A WNT5A PTPRK PTPRK CDKN1C CDKN1C GKN3 GKN3 GATA3 GATA3 IRF6 IRF6 FGFR3 FGFR3 CDKN1B CDKN1B IL12B IL12B STK3 STK3 IFT52 IFT52 SERPINF1 SERPINF1 KLF9 KLF9 DRD2 DRD2 NOTCH1 NOTCH1 A0A287B8J8_PIG A0A287B8J8_PIG PDX1 PDX1 MMRN2 MMRN2 B4GALT1 B4GALT1 DLL4 DLL4 IL26 IL26 VDR VDR TBC1D31 TBC1D31 OVOL1 OVOL1 INTU INTU NKX3-1 NKX3-1 ATP5F1A ATP5F1A PHOX2B PHOX2B PEX2 PEX2 DLG2 DLG2 A0A5G2QG99_PIG A0A5G2QG99_PIG FLT1 FLT1 MTSS1 MTSS1 A0A5G2R6Q7_PIG A0A5G2R6Q7_PIG FLCN FLCN ROBO1 ROBO1 HPN HPN MCC MCC CASK CASK STK4 STK4 AIMP1 AIMP1 EAF2 EAF2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTCH1Protein patched homolog 1 isoform L. (1452 aa)
BRCA2Tower domain-containing protein. (1163 aa)
A4GNTAlpha-1,4-N-acetylglucosaminyltransferase isoform X1. (340 aa)
PHB2Prohibitin. (299 aa)
WDR13WD repeat domain 13. (587 aa)
ATP5IF1ATPase inhibitor, mitochondrial; Endogenous F(1)F(o)-ATPase inhibitor limiting ATP depletion when the mitochondrial membrane potential falls below a threshold and the F(1)F(o)-ATP synthase starts hydrolyzing ATP to pump protons out of the mitochondrial matrix. Required to avoid the consumption of cellular ATP when the F(1)F(o)-ATP synthase enzyme acts as an ATP hydrolase. Indirectly acts as a regulator of heme synthesis in erythroid tissues: regulates heme synthesis by modulating the mitochondrial pH and redox potential, allowing FECH to efficiently catalyze the incorporation of iron i [...] (108 aa)
GDF5Growth differentiation factor 5. (499 aa)
SYNJ2BPSynaptojanin 2 binding protein. (164 aa)
IFT80Intraflagellar transport 80. (767 aa)
NF1Neurofibromin 1. (2847 aa)
CCL2C-C motif chemokine 2; Acts as a ligand for C-C chemokine receptor CCR2 (By similarity). Signals through binding and activation of CCR2 and induces a strong chemotactic response and mobilization of intracellular calcium ions (By similarity). Exhibits a chemotactic activity for monocytes and basophils but not neutrophils or eosinophils (By similarity). Plays an important role in mediating peripheral nerve injury-induced neuropathic pain (By similarity). Increases NMDA-mediated synaptic transmission in both dopamine D1 and D2 receptor-containing neurons, which may be caused by MAPK/ERK-d [...] (99 aa)
NGFRNerve growth factor receptor. (414 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1517 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
CAV2Caveolin-2; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity. Acts as an accessory protein in conjunction with CAV1 in targeting to lipid rafts and driving caveolae formation. Positive regulator of cellular mitogenesis of the MAPK signaling pathway. Required for the insulin-stimulated nuclear translocation and activation of MAPK1 and STAT3, and the subsequent regulation of cell cycle progression (By similarity); Belongs to the caveolin family. (162 aa)
TRIM24Transcription intermediary factor 1-alpha isoform X1. (1050 aa)
COL4A3Collagen type IV alpha 3 chain. (1669 aa)
AQP11Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)
MEF2CMyocyte-specific enhancer factor 2C; Transcription activator which binds specifically to the MEF2 element present in the regulatory regions of many muscle-specific genes. Controls cardiac morphogenesis and myogenesis, and is also involved in vascular development. Enhances transcriptional activation mediated by SOX18. Plays an essential role in hippocampal-dependent learning and memory by suppressing the number of excitatory synapses and thus regulating basal and evoked synaptic transmission. Crucial for normal neuronal development, distribution, and electrical activity in the neocortex [...] (483 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
TNMDTenomodulin. (317 aa)
ARAndrogen receptor; Steroid hormone receptors are ligand-activated transcription factors that regulate eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. Transcription factor activity is modulated by bound coactivator and corepressor proteins like ZBTB7A that recruits NCOR1 and NCOR2 to the androgen response elements/ARE on target genes, negatively regulating androgen receptor signaling and androgen-induced cell proliferation. Transcription activation is also down-regulated by NR0B2. Activated, but not phosphorylated, by HIPK3 and ZIPK/DAPK3. (896 aa)
MAGED1Melanoma-associated antigen D1; Involved in the apoptotic response after nerve growth factor (NGF) binding in neuronal cells. Inhibits cell cycle progression, and facilitates NGFR-mediated apoptosis. May act as a regulator of the function of DLX family members. May enhance ubiquitin ligase activity of RING-type zinc finger-containing E3 ubiquitin-protein ligases. Proposed to act through recruitment and/or stabilization of the Ubl- conjugating enzyme (E2) at the E3:substrate complex. Plays a role in the circadian rhythm regulation. May act as RORA co-regulator, modulating the expression [...] (835 aa)
IFT57Intraflagellar transport 57. (428 aa)
GHRLAppetite-regulating hormone; Ghrelin is the ligand for growth hormone secretagogue receptor type 1 (GHSR). Induces the release of growth hormone from the pituitary. Has an appetite-stimulating effect, induces adiposity and stimulates gastric acid secretion. Involved in growth regulation (By similarity); Belongs to the motilin family. (118 aa)
DUSP10Dual specificity protein phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (482 aa)
CDC73Cell division cycle 73. (531 aa)
GDF2Growth differentiation factor 2. (427 aa)
CNMDChondromodulin. (335 aa)
RB1RB transcriptional corepressor 1. (938 aa)
SFRP2Uncharacterized protein. (294 aa)
XDHXanthine dehydrogenase/oxidase. (1336 aa)
ATOH8Atonal bHLH transcription factor 8. (315 aa)
WDR77WD repeat domain 77. (342 aa)
SULF1Sulfatase 1. (1108 aa)
DAB2IPDAB2 interacting protein. (1196 aa)
CDKN2BCyclin dependent kinase inhibitor 2B. (131 aa)
IFT74Intraflagellar transport 74. (600 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
THBS1Uncharacterized protein. (1170 aa)
KDF1Keratinocyte differentiation factor 1. (398 aa)
APOEApolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] (292 aa)
MARVELD3MARVEL domain-containing protein. (390 aa)
VASH1Vasohibin 1. (418 aa)
NR2F2Nuclear receptor subfamily 2 group F member 2. (414 aa)
TINF2TERF1 interacting nuclear factor 2. (455 aa)
NKX2-8NK2 homeobox 8. (241 aa)
PPARDPeroxisome proliferator-activated receptor delta. (441 aa)
ACVRL1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
WNT10BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (389 aa)
CD109CD109 antigen isoform 1 preproprotein. (1449 aa)
APOHBeta-2-glycoprotein 1. (345 aa)
ZEB1Zinc finger E-box binding homeobox 1. (1128 aa)
SFRP1Secreted frizzled-related protein 1. (308 aa)
GPC3Glypican-3 isoform 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (579 aa)
FGFR2Fibroblast growth factor receptor. (820 aa)
TGFB1Transforming growth factor beta-1 proprotein; Transforming growth factor beta-1 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-1 (TGF-beta-1) chains, which constitute the regulatory and active subunit of TGF-beta-1, respectively. Transforming growth factor beta-1: Multifunctional protein that regulates the growth and differentiation of various cell types and is involved in various processes, such as normal development, immune function, microglia function and responses to neurodegeneration (By similarity). Activation into mature form fo [...] (390 aa)
ALOX5Arachidonate 5-lipoxygenase. (638 aa)
CDK6Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily. (326 aa)
TGFBR1TGF-beta receptor type-1; Transmembrane serine/threonine kinase forming with the TGF- beta type II serine/threonine kinase receptor, TGFBR2, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinog [...] (560 aa)
DLG1Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family. (939 aa)
SAV1Salvador family WW domain containing protein 1. (433 aa)
CAV1Caveolin-1; May act as a scaffolding protein within caveolar membranes. Forms a stable heterooligomeric complex with CAV2 that targets to lipid rafts and drives caveolae formation. Mediates the recruitment of CAVIN proteins (CAVIN1/2/3/4) to the caveolae (By similarity). Interacts directly with G-protein alpha subunits and can functionally regulate their activity (By similarity). Involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Its binding to DPP4 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependen [...] (177 aa)
KRIT1Uncharacterized protein. (814 aa)
PDCD10Programmed cell death protein 10. (212 aa)
LIMS2LIM and senescent cell antigen-like-containing domain protein; Adapter protein in a cytoplasmic complex linking beta- integrins to the actin cytoskeleton, bridges the complex to cell surface receptor tyrosine kinases and growth factor receptors. (357 aa)
PRLProlactin; Prolactin acts primarily on the mammary gland by promoting lactation. (229 aa)
STAT1Signal transducer and activator of transcription 1; Signal transducer and transcription activator that mediates cellular responses to interferons (IFNs), cytokine KITLG/SCF and other cytokines and other growth factors. Following type I IFN (IFN-alpha and IFN-beta) binding to cell surface receptors, signaling via protein kinases leads to activation of Jak kinases (TYK2 and JAK1) and to tyrosine phosphorylation of STAT1 and STAT2. The phosphorylated STATs dimerize and associate with ISGF3G/IRF-9 to form a complex termed ISGF3 transcription factor, that enters the nucleus. ISGF3 binds to [...] (856 aa)
P14ARFANK_REP_REGION domain-containing protein. (159 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (570 aa)
KRT4Keratin 4; Belongs to the intermediate filament family. (533 aa)
PAX6Paired box 6. (498 aa)
TGFB2Transforming growth factor beta-2 proprotein; Transforming growth factor beta-2 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-2 (TGF-beta-2) chains, which constitute the regulatory and active subunit of TGF-beta-2, respectively. Transforming growth factor beta-2: Multifunctional protein that regulates various processes such as angiogenesis and heart development (By similarity). Activation into mature form follows different steps: following cleavage of the proprotein in the Golgi apparatus, Latency-associated peptide (LAP) and Transfor [...] (443 aa)
PTPRMProtein tyrosine phosphatase receptor type M. (1507 aa)
SNAI2Snail family transcriptional repressor 2. (268 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
PTPRKProtein tyrosine phosphatase receptor type K. (1554 aa)
CDKN1CCyclin dependent kinase inhibitor 1C. (262 aa)
GKN3Gastrokine-3; May inhibit gastric epithelial cell proliferation. Belongs to the gastrokine family. (170 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3. (444 aa)
IRF6Interferon regulatory factor 6. (467 aa)
FGFR3Fibroblast growth factor receptor. (855 aa)
CDKN1Bp27Kip1. (198 aa)
IL12BInterleukin-12 subunit beta; Cytokine that can act as a growth factor for activated T and NK cells, enhance the lytic activity of NK/lymphokine-activated killer cells, and stimulate the production of IFN-gamma by resting PBMC. Belongs to the IL-12B family. (324 aa)
STK3Serine/threonine kinase 3. (542 aa)
IFT52Intraflagellar transport protein 52 homolog isoform X1. (446 aa)
SERPINF1Serpin family F member 1; Belongs to the serpin family. (433 aa)
KLF9Krueppel-like factor 9; Transcription factor that binds to GC box promoter elements. Selectively activates mRNA synthesis from genes containing tandem repeats of GC boxes but represses genes with a single GC box. Acts as an epidermal circadian transcription factor regulating keratinocyte proliferation; Belongs to the Sp1 C2H2-type zinc-finger protein family. (334 aa)
DRD2Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family. (455 aa)
NOTCH1Neurogenic locus notch homolog protein 1 preproprotein. (2560 aa)
A0A287B8J8_PIGUncharacterized protein. (617 aa)
PDX1Homeobox domain-containing protein. (284 aa)
MMRN2Multimerin 2. (931 aa)
B4GALT1Beta-1,4-galactosyltransferase 1. (401 aa)
DLL4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (685 aa)
IL26Interleukin 26. (171 aa)
VDRVitamin D3 receptor; Nuclear receptor for calcitriol, the active form of vitamin D3 which mediates the action of this vitamin on cells (By similarity). Enters the nucleus upon vitamin D3 binding where it forms heterodimers with the retinoid X receptor/RXR (By similarity). The VDR-RXR heterodimers bind to specific response elements on DNA and activate the transcription of vitamin D3-responsive target genes (By similarity). Plays a central role in calcium homeostasis (By similarity). (520 aa)
TBC1D31TBC1 domain family member 31. (1066 aa)
OVOL1Ovo like transcriptional repressor 1. (313 aa)
INTUInturned planar cell polarity protein. (937 aa)
NKX3-1Homeobox protein Nkx-3.1 isoform 1. (247 aa)
ATP5F1AATP synthase subunit alpha, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the [...] (737 aa)
PHOX2BPaired like homeobox 2B. (314 aa)
PEX2Peroxisomal biogenesis factor 2. (320 aa)
DLG2Discs large MAGUK scaffold protein 2. (1012 aa)
A0A5G2QG99_PIGUncharacterized protein. (2082 aa)
FLT1Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1302 aa)
MTSS1MTSS I-BAR domain containing 1. (766 aa)
A0A5G2R6Q7_PIGUncharacterized protein. (97 aa)
FLCNUDENN FLCN/SMCR8-type domain-containing protein. (611 aa)
ROBO1Roundabout guidance receptor 1. (1687 aa)
HPNHepsin; Belongs to the peptidase S1 family. (449 aa)
MCCMCC regulator of WNT signaling pathway. (982 aa)
CASKCalcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (925 aa)
STK4Serine/threonine kinase 4. (502 aa)
AIMP1Aminoacyl tRNA synthetase complex interacting multifunctional protein 1. (335 aa)
EAF2ELL associated factor 2. (273 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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