STRINGSTRING
INO80 INO80 APLF APLF DMAP1 DMAP1 CCDC117 CCDC117 SPIDR SPIDR NBN NBN NABP2 NABP2 MEAF6 MEAF6 ARID2 ARID2 EYA1 EYA1 DBF4 DBF4 GREM1 GREM1 ZNF112 ZNF112 TP53BP1 TP53BP1 YEATS4 YEATS4 TNKS TNKS PAXIP1 PAXIP1 SLX1A SLX1A INO80E INO80E A0A286ZVL9_PIG A0A286ZVL9_PIG EPC1 EPC1 ERCC2 ERCC2 ACTB ACTB XRCC1 XRCC1 TRIM28 TRIM28 PRKD2 PRKD2 I3LA07_PIG I3LA07_PIG TIGAR TIGAR CHTF18 CHTF18 BRD8 BRD8 PARP1 PARP1 IL6 IL6 PARP3 PARP3 HDAC10 HDAC10 MAD2L2 MAD2L2 MCRS1 MCRS1 CDK2 CDK2 TIMELESS TIMELESS CCT2 CCT2 PML PML BAZ1A BAZ1A SPIRE2 SPIRE2 EXOSC6 EXOSC6 TERF2 TERF2 GINS3 GINS3 BAX BAX RUVBL2 RUVBL2 PRKCG PRKCG TFPT TFPT EYA3 EYA3 SMOC2 SMOC2 MAP3K4 MAP3K4 TCP1 TCP1 KHDC3L KHDC3L OOEP OOEP RAD51 RAD51 EXOSC3 EXOSC3 CIZ1 CIZ1 ENDOG ENDOG PRKDC PRKDC POGZ POGZ BCL7B BCL7B USP7 USP7 SLX4 SLX4 NPAS2 NPAS2 FAM178B FAM178B CCT4 CCT4 MSH2 MSH2 NSD2 NSD2 PARM1 PARM1 ABRAXAS1 ABRAXAS1 ING3 ING3 GINS2 GINS2 DBF4B DBF4B PTPRC PTPRC SPIRE1 SPIRE1 PIAS4 PIAS4 PCNA PCNA USP9X USP9X PDGFB PDGFB CEBPG CEBPG A0A287AFM3_PIG A0A287AFM3_PIG FOXM1 FOXM1 POLG2 POLG2 FAM168A FAM168A TMEM161A TMEM161A INS INS DNMT3L DNMT3L SSBP1 SSBP1 DSCC1 DSCC1 UBE2B UBE2B CCT3 CCT3 PRDM7 PRDM7 EYA4 EYA4 SELENOK SELENOK FH FH DNA2 DNA2 INO80D INO80D NPM2 NPM2 ACD ACD BRCA1 BRCA1 STOML2 STOML2 DERPC DERPC OTUD4 OTUD4 BABAM1 BABAM1 TNFSF13 TNFSF13 A0A286ZQ36_PIG A0A286ZQ36_PIG SMARCA5 SMARCA5 RAD51AP1 RAD51AP1 PPARGC1A PPARGC1A RBBP8 RBBP8 SHLD2 SHLD2 LOC100625207 LOC100625207 EYA2 EYA2 CTNNB1 CTNNB1 YY1 YY1 FUS FUS PPP1R10 PPP1R10 FGFR4 FGFR4 NOX4 NOX4 TGFB1 TGFB1 TFRC TFRC DHX9 DHX9 FANCB FANCB EGF EGF NRM NRM DHX36 DHX36 DTX3L DTX3L UIMC1 UIMC1 HELQ HELQ HNRNPD HNRNPD HMGB2 HMGB2 MAPKAPK5 MAPKAPK5 SIRT1 SIRT1 ERCC6 ERCC6 TNKS2 TNKS2 MMS19 MMS19 UCHL5 UCHL5 PRKCQ PRKCQ GNL3 GNL3 ACTR8 ACTR8 ACTL6A ACTL6A RFC4 RFC4 ATRX ATRX MORF4L2 MORF4L2 DKC1 DKC1 CLCF1 CLCF1 SIRT6 SIRT6 HDGFL2 HDGFL2 MRNIP MRNIP SLF1 SLF1 IL4 IL4 ATM ATM HGF HGF EPC2 EPC2 WRN WRN RIF1 RIF1 POT1 POT1 FGF10 FGF10 TBX21 TBX21 MBTD1 MBTD1 WRAP53 WRAP53 SMCHD1 SMCHD1 WT1 WT1 STAT6 STAT6 RUVBL1 RUVBL1 EP400 EP400 CCT6A CCT6A SLF2 SLF2 FGF2 FGF2 MRE11 MRE11 ZCWPW1 ZCWPW1 RTEL1 RTEL1 PRIM2 PRIM2 STN1 STN1 BCAR3 BCAR3 GLI1 GLI1 MAPK3 MAPK3 RAD50 RAD50 MGMT MGMT KMT5B KMT5B A0A287BQB1_PIG A0A287BQB1_PIG E2F8 E2F8 IL2 IL2 RFC2 RFC2 KMT5C KMT5C RPS3 RPS3 MECP2 MECP2 XRCC5 XRCC5 STPG4 STPG4 NVL NVL UBE2V2 UBE2V2 E2F7 E2F7 A0A5G2R3X2_PIG A0A5G2R3X2_PIG KAT5 KAT5 RFC3 RFC3 A0A5G2QSK7_PIG A0A5G2QSK7_PIG BCL7A BCL7A PNKP PNKP BRCC3 BRCC3 EREG EREG NEK2 NEK2 EGFR EGFR A0A5G2RCW4_PIG A0A5G2RCW4_PIG WDR48 WDR48 A0A5G2R3D3_PIG A0A5G2R3D3_PIG CDC7 CDC7 FBXO4 FBXO4 A0A5G2QVU0_PIG A0A5G2QVU0_PIG HMCES HMCES KAT7 KAT7 GRHL2 GRHL2 BRPF3 BRPF3 A0A5G2R4M1_PIG A0A5G2R4M1_PIG NFRKB NFRKB CD28 CD28 ERCC8 ERCC8 MFSD11 MFSD11 A0A5G2RES6_PIG A0A5G2RES6_PIG ENSSSCP00000073725 ENSSSCP00000073725 SHLD1 SHLD1 BCL7C BCL7C MAPK1 MAPK1 RNF168 RNF168 PARN PARN A0A5G2RGJ5_PIG A0A5G2RGJ5_PIG MYC MYC CCT7 CCT7 NEK7 NEK7 ATAD5 ATAD5 BABAM2 BABAM2 HMGB1 HMGB1 GINS4 GINS4 PRKCD PRKCD TOX TOX ANKRD39 ANKRD39 CDT1 CDT1 CD40 CD40 A0A287B846_PIG A0A287B846_PIG PARP9 PARP9 VPS72 VPS72 WAS WAS
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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INO80INO80 complex ATPase subunit. (1566 aa)
APLFAprataxin and PNKP like factor. (572 aa)
DMAP1DNA methyltransferase 1-associated protein 1 isoform X1. (468 aa)
CCDC117Coiled-coil domain containing 117. (279 aa)
SPIDRDNA repair-scaffolding protein isoform 1. (924 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (752 aa)
NABP2SOSS complex subunit B1 isoform X1. (211 aa)
MEAF6MYST/Esa1 associated factor 6. (216 aa)
ARID2AT-rich interaction domain 2. (1833 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (618 aa)
DBF4DBF4-type domain-containing protein. (675 aa)
GREM1Gremlin 1, DAN family BMP antagonist. (240 aa)
ZNF112Uncharacterized protein. (807 aa)
TP53BP1Tumor protein p53 binding protein 1. (1931 aa)
YEATS4YEATS domain containing 4. (227 aa)
TNKSPoly [ADP-ribose] polymerase. (1327 aa)
PAXIP1PAX interacting protein 1. (1030 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (275 aa)
INO80EINO80 complex subunit E isoform 1. (244 aa)
A0A286ZVL9_PIGRING-type domain-containing protein. (137 aa)
EPC1Enhancer of polycomb homolog. (841 aa)
ERCC2General transcription and DNA repair factor IIH helicase subunit XPD isoform 1. (763 aa)
ACTBActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
XRCC1X-ray repair cross complementing 1. (617 aa)
TRIM28Tripartite motif containing 28. (868 aa)
PRKD2Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. (889 aa)
I3LA07_PIGUncharacterized protein. (398 aa)
TIGARTP53 induced glycolysis regulatory phosphatase. (269 aa)
CHTF18Chromosome transmission fidelity factor 18. (942 aa)
BRD8Bromodomain containing 8. (1236 aa)
PARP1Poly [ADP-ribose] polymerase. (1017 aa)
IL6Interleukin-6; Cytokine with a wide variety of biological functions. It is a potent inducer of the acute phase response. Plays an essential role in the final differentiation of B-cells into Ig-secreting cells Involved in lymphocyte and monocyte differentiation. Acts on B-cells, T-cells, hepatocytes, hematopoietic progenitor cells and cells of the CNS. Required for the generation of T(H)17 cells. Also acts as a myokine. It is discharged into the bloodstream after muscle contraction and acts to increase the breakdown of fats and to improve insulin resistance. It induces myeloma and plasm [...] (241 aa)
PARP3Poly [ADP-ribose] polymerase. (539 aa)
HDAC10Histone deacetylase 10. (671 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
MCRS1Microspherule protein 1. (487 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (381 aa)
TIMELESSTimeless circadian regulator. (1206 aa)
CCT2Chaperonin containing TCP1 subunit 2. (534 aa)
PMLPromyelocytic leukemia. (827 aa)
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1557 aa)
SPIRE2Spire type actin nucleation factor 2. (763 aa)
EXOSC6Exosome component 6. (272 aa)
TERF2Telomeric repeat-binding factor 2. (542 aa)
GINS3GINS complex subunit 3. (216 aa)
BAXTrans-1,2-dihydrobenzene-1,2-diol dehydrogenase; Belongs to the Gfo/Idh/MocA family. (480 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (525 aa)
PRKCGProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (759 aa)
TFPTTCF3 fusion partner isoform 1. (253 aa)
EYA3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (573 aa)
SMOC2SPARC related modular calcium binding 2. (613 aa)
MAP3K4Mitogen-activated protein kinase kinase kinase 4. (1624 aa)
TCP1Uncharacterized protein. (559 aa)
KHDC3LMOEP19 domain-containing protein. (142 aa)
OOEPOocyte-expressed protein homolog. (148 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
EXOSC3Exosome complex component RRP40 isoform 1. (275 aa)
CIZ1CDKN1A interacting zinc finger protein 1. (758 aa)
ENDOGEndonuclease. (299 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4136 aa)
POGZPogo transposable element with ZNF domain isoform X1. (1412 aa)
BCL7BBAF chromatin remodeling complex subunit BCL7B. (249 aa)
USP7Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1109 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1778 aa)
NPAS2Neuronal PAS domain protein 2. (796 aa)
FAM178BUncharacterized protein. (569 aa)
CCT4T-complex protein 1 subunit delta. (539 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (920 aa)
NSD2Histone-lysine N-methyltransferase NSD2 isoform 1. (1338 aa)
PARM1Uncharacterized protein. (302 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (405 aa)
ING3Inhibitor of growth protein. (418 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
DBF4BDBF4 zinc finger B. (640 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (1092 aa)
SPIRE1Spire type actin nucleation factor 1. (802 aa)
PIAS4Protein inhibitor of activated STAT 4. (566 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (270 aa)
USP9XPutative ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4; Belongs to the peptidase C19 family. (2554 aa)
PDGFBPlatelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (240 aa)
CEBPGCCAAT enhancer binding protein gamma. (164 aa)
A0A287AFM3_PIGReverse transcriptase domain-containing protein. (831 aa)
FOXM1Forkhead box M1. (766 aa)
POLG2DNA polymerase gamma 2, accessory subunit. (481 aa)
FAM168AFamily with sequence similarity 168 member A. (234 aa)
TMEM161ATransmembrane protein 161A. (479 aa)
INSInsulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (108 aa)
DNMT3LPHD-type domain-containing protein. (382 aa)
SSBP1Single stranded DNA binding protein 1. (163 aa)
DSCC1DNA replication and sister chromatid cohesion 1. (392 aa)
UBE2BUbiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
CCT3T-complex protein 1 subunit gamma; Component of the chaperonin-containing T-complex (TRiC), a molecular chaperone complex that assists the folding of proteins upon ATP hydrolysis. The TRiC complex mediates the folding of WRAP53/TCAB1, thereby regulating telomere maintenance. As part of the TRiC complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. The TRiC complex plays a role in the folding of actin and tubulin. (545 aa)
PRDM7PR/SET domain 7. (466 aa)
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (645 aa)
SELENOKSelenoprotein K; Required for Ca(2+) flux in immune cells and plays a role in T-cell proliferation and in T-cell and neutrophil migration (By similarity). Involved in endoplasmic reticulum-associated degradation (ERAD) of soluble glycosylated proteins (By similarity). Required for palmitoylation and cell surface expression of CD36 and involved in macrophage uptake of low-density lipoprotein and in foam cell formation (By similarity). Together with ZDHHC6, required for palmitoylation of ITPR1 in immune cells, leading to regulate ITPR1 stability and function. Plays a role in protection o [...] (93 aa)
FHFumarate hydratase, mitochondrial; Catalyzes the reversible stereospecific interconversion of fumarate to L-malate. Experiments in different species have demonstrated that specific isoforms of this protein act in defined pathways and favor one direction over the other (Probable). [Isoform Cytoplasmic]: Catalyzes the dehydration of L-malate to fumarate. Fumarate metabolism in the cytosol plays a role during urea cycle and arginine metabolism; fumarate being a by-product of the urea cycle and amino-acid catabolism (By similarity). Also plays a role in DNA repair by promoting non-homolog [...] (466 aa)
DNA2DNA replication helicase/nuclease 2. (1084 aa)
INO80DINO80 complex subunit D. (1028 aa)
NPM2Nucleoplasmin domain-containing protein. (260 aa)
ACDACD shelterin complex subunit and telomerase recruitment factor. (477 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1865 aa)
STOML2Stomatin like 2. (356 aa)
DERPCDERPC proline and glycine rich nuclear protein. (643 aa)
OTUD4OTU deubiquitinase 4. (1110 aa)
BABAM1BRISC and BRCA1 A complex member 1. (332 aa)
TNFSF13TNF superfamily member 13; Belongs to the tumor necrosis factor family. (251 aa)
A0A286ZQ36_PIGUncharacterized protein. (281 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1003 aa)
RAD51AP1RAD51 associated protein 1. (345 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha; Transcriptional coactivator for steroid receptors and nuclear receptors. Greatly increases the transcriptional activity of PPARG and thyroid hormone receptor on the uncoupling protein promoter. Can regulate key mitochondrial genes that contribute to the program of adaptive thermogenesis. Plays an essential role in metabolic reprogramming in response to dietary availability through coordination of the expression of a wide array of genes involved in glucose and fatty acid metabolism. Induces the expression of PERM1 in [...] (796 aa)
RBBP8RB binding protein 8, endonuclease. (897 aa)
SHLD2Shieldin complex subunit 2. (907 aa)
LOC100625207USP domain-containing protein; Belongs to the peptidase C19 family. (2554 aa)
EYA2Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (583 aa)
CTNNB1Catenin beta 1. (808 aa)
YY1YY1 transcription factor. (438 aa)
FUSFUS RNA binding protein. (518 aa)
PPP1R10Serine/threonine-protein phosphatase 1 regulatory subunit 10; Scaffold protein which mediates the formation of the PTW/PP1 phosphatase complex by providing a binding platform to each component of the complex. The PTW/PP1 phosphatase complex plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Mediates interaction of WDR82 and PPP1CA. Inhibitor of PPP1CA and PPP1CC phosphatase activities. Has inhibitory activity on PPP1CA only when phosphorylated. Binds to mRNA, single-stranded DNA (ssDNA), poly(A) and poly(G) [...] (925 aa)
FGFR4Fibroblast growth factor receptor. (903 aa)
NOX4NADPH oxidase 4. (578 aa)
TGFB1Transforming growth factor beta-1 proprotein; Transforming growth factor beta-1 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-1 (TGF-beta-1) chains, which constitute the regulatory and active subunit of TGF-beta-1, respectively. Transforming growth factor beta-1: Multifunctional protein that regulates the growth and differentiation of various cell types and is involved in various processes, such as normal development, immune function, microglia function and responses to neurodegeneration (By similarity). Activation into mature form fo [...] (390 aa)
TFRCTransferrin receptor protein 1; Cellular uptake of iron occurs via receptor-mediated endocytosis of ligand-occupied transferrin receptor into specialized endosomes. Endosomal acidification leads to iron release. The apotransferrin-receptor complex is then recycled to the cell surface with a return to neutral pH and the concomitant loss of affinity of apotransferrin for its receptor. Transferrin receptor is necessary for development of erythrocytes and the nervous system (By similarity). Positively regulates T and B cell proliferation through iron uptake (By similarity). (794 aa)
DHX9ATP-dependent RNA helicase A. (1384 aa)
FANCBFA complementation group B. (855 aa)
EGFPro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6 (By similarity). (1194 aa)
NRMNurim. (203 aa)
DHX36DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1. (1012 aa)
DTX3LDeltex E3 ubiquitin ligase 3L. (737 aa)
UIMC1BRCA1-A complex subunit RAP80; Ubiquitin-binding protein. Specifically recognizes and binds 'Lys-63'-linked ubiquitin. Plays a central role in the BRCA1-A complex by specifically binding 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX. Also weakly binds monoubiquitin but with much less affinity than 'Lys-63'-linked ubiquitin. M [...] (622 aa)
HELQHelicase, POLQ like. (1076 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0 isoform a. (355 aa)
HMGB2High mobility group protein B2; Multifunctional protein with various roles in different cellular compartments. May act in a redox sensitive manner. In the nucleus is an abundant chromatin-associated non-histone protein involved in transcription, chromatin remodeling and V(D)J recombination and probably other processes (By similarity). Binds DNA with a preference to non-canonical DNA structures such as single-stranded DNA. Can bent DNA and enhance DNA flexibility by looping thus providing a mechanism to promote activities on various gene promoters by enhancing transcription factor bindi [...] (210 aa)
MAPKAPK5Protein kinase domain-containing protein. (543 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1 isoform a. (742 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1462 aa)
TNKS2Poly [ADP-ribose] polymerase. (1316 aa)
MMS19MMS19 homolog, cytosolic iron-sulfur assembly component. (1039 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase isozyme L5; Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via ADRM1 (By similarity). (327 aa)
PRKCQProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (732 aa)
GNL3G protein nucleolar 3. (551 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
ACTL6AActin-like protein 6A isoform X1; Belongs to the actin family. (429 aa)
RFC4Replication factor C subunit 4. (364 aa)
ATRXATRX chromatin remodeler. (2486 aa)
MORF4L2Mortality factor 4 like 2. (288 aa)
DKC1Uncharacterized protein. (521 aa)
CLCF1Uncharacterized protein. (484 aa)
SIRT6Deacetylase sirtuin-type domain-containing protein. (327 aa)
HDGFL2HDGF like 2. (667 aa)
MRNIPUncharacterized protein. (216 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1055 aa)
IL4Interleukin-4; Participates in at least several B-cell activation processes as well as of other cell types. It is a costimulator of DNA-synthesis. It induces the expression of class II MHC molecules on resting B-cells. It enhances both secretion and cell surface expression of IgE and IgG1. It also regulates the expression of the low affinity Fc receptor for IgE (CD23) on both lymphocytes and monocytes. Positively regulates IL31RA expression in macrophages. Stimulates autophagy in dendritic cells by interfering with mTORC1 signaling and through the induction of RUFY4; Belongs to the IL- [...] (133 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and monospec [...] (3057 aa)
HGFHepatocyte growth factor; Belongs to the peptidase S1 family. (814 aa)
EPC2Enhancer of polycomb homolog. (807 aa)
WRNWRN RecQ like helicase. (1466 aa)
RIF1Replication timing regulatory factor 1. (2466 aa)
POT1Protection of telomeres 1. (813 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (211 aa)
TBX21Uncharacterized protein. (535 aa)
MBTD1Mbt domain containing 1. (715 aa)
WRAP53WD repeat containing antisense to TP53. (539 aa)
SMCHD1Structural maintenance of chromosomes flexible hinge domain containing 1. (1997 aa)
WT1Wilms tumor protein homolog; Transcription factor that plays an important role in cellular development and cell survival. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'. Regulates the expression of numerous target genes, including EPO. Plays an essential role for development of the urogenital system. It has a tumor suppressor as well as an oncogenic role in tumor formation. Function may be isoform-specific: isoforms lacking the KTS motif may act as transcription factors. Isoforms containing the KTS motif may bind mRNA and play a role in mRNA metabolism or splicing. Isofor [...] (523 aa)
STAT6Signal transducer and activator of transcription. (847 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
EP400E1A binding protein p400. (3210 aa)
CCT6AT-complex protein 1 subunit zeta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (By similarity). (531 aa)
SLF2SMC5-SMC6 complex localization factor 2. (1169 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (316 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
ZCWPW1Zinc finger CW-type and PWWP domain containing 1. (653 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1349 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (506 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (405 aa)
BCAR3BCAR3 adaptor protein, NSP family member. (860 aa)
GLI1Zinc finger protein GLI1 isoform X1. (1106 aa)
MAPK3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
RAD50Zinc-hook domain-containing protein. (1358 aa)
MGMTO-6-methylguanine-DNA methyltransferase. (265 aa)
KMT5BLysine methyltransferase 5B. (915 aa)
A0A287BQB1_PIGzf-C3HC4 domain-containing protein. (282 aa)
E2F8E2F transcription factor 8. (859 aa)
IL2Interleukin-2; Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. Can stimulate B-cells, monocytes, lymphokine-activated killer cells, natural killer cells, and glioma cells; Belongs to the IL-2 family. (154 aa)
RFC2Replication factor C subunit 2 isoform 1. (352 aa)
KMT5CLysine methyltransferase 5C. (455 aa)
RPS340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] (259 aa)
MECP2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (489 aa)
XRCC5X-ray repair cross complementing 5. (1011 aa)
STPG4Sperm-tail PG-rich repeat containing 4. (262 aa)
NVLNuclear VCP like. (868 aa)
UBE2V2UBIQUITIN_CONJUGAT_2 domain-containing protein. (159 aa)
E2F7E2F transcription factor 7. (908 aa)
A0A5G2R3X2_PIGReverse transcriptase domain-containing protein. (774 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (576 aa)
RFC3Replication factor C subunit 3 isoform 1. (356 aa)
A0A5G2QSK7_PIGReverse transcriptase domain-containing protein. (680 aa)
BCL7ABAF chromatin remodeling complex subunit BCL7A. (260 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (578 aa)
BRCC3BRCA1/BRCA2-containing complex subunit 3. (316 aa)
EREGEpiregulin. (168 aa)
NEK2NIMA related kinase 2. (404 aa)
EGFRReceptor protein-tyrosine kinase. (1205 aa)
A0A5G2RCW4_PIGUncharacterized protein. (95 aa)
WDR48WD repeat domain 48. (740 aa)
A0A5G2R3D3_PIGReverse transcriptase domain-containing protein. (1014 aa)
CDC7Cell division cycle 7-related protein kinase isoform X1. (576 aa)
FBXO4F-box only protein 4. (387 aa)
A0A5G2QVU0_PIGReverse transcriptase domain-containing protein. (742 aa)
HMCESAbasic site processing protein HMCES; Sensor of abasic sites in single-stranded DNA (ssDNA) required to preserve genome integrity by promoting error-free repair of abasic sites. Acts as an enzyme that recognizes and binds abasic sites in ssDNA at replication forks and chemically modifies the lesion by forming a covalent cross-link with DNA. The HMCES DNA-protein cross- link is then degraded by the proteasome. Promotes error-free repair of abasic sites by acting as a 'suicide' enzyme that is degraded, thereby protecting abasic sites from translesion synthesis (TLS) polymerases and endon [...] (410 aa)
KAT7Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (613 aa)
GRHL2Grainyhead like transcription factor 2. (626 aa)
BRPF3Bromodomain and PHD finger containing 3. (1150 aa)
A0A5G2R4M1_PIGReverse transcriptase domain-containing protein. (784 aa)
NFRKBNuclear factor related to kappaB binding protein. (1333 aa)
CD28IGv domain-containing protein. (222 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
MFSD11Major facilitator superfamily domain containing 11. (491 aa)
A0A5G2RES6_PIGReverse transcriptase domain-containing protein. (356 aa)
ENSSSCP00000073725annotation not available (332 aa)
SHLD1Shieldin complex subunit 1. (276 aa)
BCL7CBAF chromatin remodeling complex subunit BCL7C. (243 aa)
MAPK1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (568 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (575 aa)
PARNPoly(A)-specific ribonuclease. (715 aa)
A0A5G2RGJ5_PIGUncharacterized protein. (102 aa)
MYCMyc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). (452 aa)
CCT7T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (548 aa)
NEK7NIMA related kinase 7; Belongs to the protein kinase superfamily. (325 aa)
ATAD5ATPase family AAA domain containing 5. (1891 aa)
BABAM2BRISC and BRCA1 A complex member 2. (383 aa)
HMGB1High mobility group protein B1; Multifunctional redox sensitive protein with various roles in different cellular compartments. In the nucleus is one of the major chromatin-associated non-histone proteins and acts as a DNA chaperone involved in replication, transcription, chromatin remodeling, V(D)J recombination, DNA repair and genome stability. Proposed to be an universal biosensor for nucleic acids. Promotes host inflammatory response to sterile and infectious signals and is involved in the coordination and integration of innate and adaptive immune responses. In the cytoplasm functio [...] (241 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (192 aa)
PRKCDProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (723 aa)
TOXThymocyte selection associated high mobility group box. (541 aa)
ANKRD39Ankyrin repeat domain 39. (273 aa)
CDT1PI-PLC Y-box domain-containing protein. (815 aa)
CD40Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). (278 aa)
A0A287B846_PIGDBF4-type domain-containing protein. (317 aa)
PARP9Poly(ADP-ribose) polymerase family member 9. (847 aa)
VPS72Vacuolar protein sorting-associated protein 72 homolog isoform 2. (364 aa)
WASWASP actin nucleation promoting factor. (500 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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