STRINGSTRING
SHH SHH STK11 STK11 WDR77 WDR77 EAF2 EAF2 NKX3-1 NKX3-1 SERPINF1 SERPINF1 CDKN1B CDKN1B CTNNB1 CTNNB1 SOX9 SOX9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (440 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
WDR77WD repeat domain 77. (342 aa)
EAF2ELL associated factor 2. (273 aa)
NKX3-1Homeobox protein Nkx-3.1 isoform 1. (247 aa)
SERPINF1Serpin family F member 1; Belongs to the serpin family. (433 aa)
CDKN1Bp27Kip1. (198 aa)
CTNNB1Catenin beta 1. (808 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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