STRINGSTRING
POGLUT1 POGLUT1 SMAD3 SMAD3 MYF6 MYF6 RAD51B RAD51B MESP1 MESP1 MESP2 MESP2 MTHFD1 MTHFD1 PSEN1 PSEN1 TBX18 TBX18 SMAD4 SMAD4 SIX1 SIX1 DMRT2 DMRT2 CRB2 CRB2 NRARP NRARP PAX1 PAX1 LFNG LFNG SFRP2 SFRP2 LOXL3 LOXL3 DLL3 DLL3 MYF5 MYF5 NKX3-1 NKX3-1 AXIN2 AXIN2 NOG NOG TBX6 TBX6 SCX SCX TP53 TP53 XRCC2 XRCC2 TBXT TBXT FOXB1 FOXB1 MED12 MED12 FRZB FRZB NUP133 NUP133 FOXF1 FOXF1 TCAP TCAP NLE1 NLE1 LRP6 LRP6 BMPR1A BMPR1A WNT5A WNT5A EPB41L5 EPB41L5 MIB1 MIB1 SIX4 SIX4 TCF15 TCF15 LEF1 LEF1 RBBP6 RBBP6 LHX1 LHX1 KDM6A KDM6A SFRP1 SFRP1 PTCH1 PTCH1 MSGN1 MSGN1 POFUT1 POFUT1 DLL1 DLL1 WDR19 WDR19 TAF10 TAF10 WNT3A WNT3A SEMA3C SEMA3C EP300 EP300 PCDH8 PCDH8 PLXNA2 PLXNA2 WNT11 WNT11 HES7 HES7 KAT2A KAT2A MEOX1 MEOX1 SMO SMO SHH SHH IHH IHH F1SF13_PIG F1SF13_PIG MEOX2 MEOX2 ATM ATM ABI1 ABI1 ALDH1A2 ALDH1A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POGLUT1Protein O-glucosyltransferase 1 isoform X1. (392 aa)
SMAD3Mothers against decapentaplegic homolog. (434 aa)
MYF6Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). (249 aa)
RAD51BRAD51 paralog B. (365 aa)
MESP1Mesoderm posterior bHLH transcription factor 1. (256 aa)
MESP2Mesoderm posterior bHLH transcription factor 2. (371 aa)
MTHFD1Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1. (935 aa)
PSEN1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (463 aa)
TBX18T-box transcription factor TBX18. (612 aa)
SMAD4Mothers against decapentaplegic homolog 4; Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for synergistic transcriptional activity in r [...] (552 aa)
SIX1Six homeobox 1. (284 aa)
DMRT2Doublesex and mab-3 related transcription factor 2. (566 aa)
CRB2Crumbs cell polarity complex component 2. (1283 aa)
NRARPNOTCH regulated ankyrin repeat protein. (114 aa)
PAX1Paired box 1. (454 aa)
LFNGBeta-1,3-N-acetylglucosaminyltransferase. (376 aa)
SFRP2Uncharacterized protein. (294 aa)
LOXL3Lysyl oxidase like 3. (814 aa)
DLL3Delta like canonical Notch ligand 3. (619 aa)
MYF5Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (253 aa)
NKX3-1Homeobox protein Nkx-3.1 isoform 1. (247 aa)
AXIN2Axin-2. (843 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
TBX6T-box transcription factor TBX6 isoform X1. (436 aa)
SCXBasic helix-loop-helix transcription factor scleraxis. (310 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (442 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
TBXTT-box transcription factor T. (435 aa)
FOXB1Forkhead box protein B1. (325 aa)
MED12Mediator complex subunit 12. (2187 aa)
FRZBSecreted frizzled-related protein 3. (325 aa)
NUP133Nucleoporin 133. (1160 aa)
FOXF1Forkhead box protein F1. (423 aa)
TCAPUncharacterized protein. (262 aa)
NLE1Notchless homolog 1. (487 aa)
LRP6Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1612 aa)
BMPR1AReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
EPB41L5Erythrocyte membrane protein band 4.1 like 5. (731 aa)
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)
SIX4Homeobox domain-containing protein. (785 aa)
TCF15Transcription factor 15. (197 aa)
LEF1Lymphoid enhancer binding factor 1. (429 aa)
RBBP6RB binding protein 6, ubiquitin ligase. (1794 aa)
LHX1LIM homeobox 1. (436 aa)
KDM6ALysine demethylase 6A. (1400 aa)
SFRP1Secreted frizzled-related protein 1. (308 aa)
PTCH1Protein patched homolog 1 isoform L. (1452 aa)
MSGN1Mesogenin 1. (194 aa)
POFUT1Protein O-fucosyltransferase 1. (404 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (729 aa)
WDR19WD repeat domain 19. (1342 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (217 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
SEMA3CSemaphorin-3C isoform 2; Belongs to the semaphorin family. (751 aa)
EP300E1A binding protein p300. (2420 aa)
PCDH8Protocadherin 8. (1071 aa)
PLXNA2Plexin A2. (1937 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (536 aa)
HES7Hes family bHLH transcription factor 7. (225 aa)
KAT2ALysine acetyltransferase 2A. (857 aa)
MEOX1Homeobox protein MOX-1 isoform X1. (254 aa)
SMOSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (783 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (440 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (454 aa)
F1SF13_PIGCobl domain-containing protein. (406 aa)
MEOX2Homeobox domain-containing protein. (303 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and monospec [...] (3057 aa)
ABI1Abl interactor 1 isoform b. (481 aa)
ALDH1A2Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family. (527 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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