STRINGSTRING
SEC31A SEC31A PLPP3 PLPP3 YIPF5 YIPF5 TFG TFG MIA2 MIA2 SAR1A SAR1A TMED5 TMED5 SEC31B SEC31B LRRK2 LRRK2 SEC16B SEC16B SEC16A SEC16A SAR1B SAR1B APOB APOB SEC23A SEC23A PDCD6 PDCD6 SEC23B SEC23B SEC24A SEC24A SEC24C SEC24C SEC24B SEC24B SEC24D SEC24D PREB PREB MIA3 MIA3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEC31ASEC31 homolog A, COPII coat complex component. (1251 aa)
PLPP3acidPPc domain-containing protein. (369 aa)
YIPF5Protein YIPF. (257 aa)
TFGTrafficking from ER to golgi regulator. (401 aa)
MIA2CTAGE family member 5 isoform X2. (1410 aa)
SAR1AGTP-binding protein SAR1a; Involved in transport from the endoplasmic reticulum to the Golgi apparatus. Required to maintain SEC16A localization at discrete locations on the ER membrane perhaps by preventing its dissociation. SAR1A-GTP-dependent assembly of SEC16A on the ER membrane forms an organized scaffold defining endoplasmic reticulum exit sites (ERES) (By similarity). (198 aa)
TMED5GOLD domain-containing protein. (226 aa)
SEC31BSEC31 homolog B, COPII coat complex component. (1210 aa)
LRRK2Uncharacterized protein. (2501 aa)
SEC16BProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1021 aa)
SEC16AProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2318 aa)
SAR1BGTP-binding protein SAR1b; Involved in transport from the endoplasmic reticulum to the Golgi apparatus. Activated by the guanine nucleotide exchange factor PREB. Involved in the selection of the protein cargo and the assembly of the COPII coat complex (By similarity). (198 aa)
APOBApolipoprotein B-100. (4573 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
PDCD6Programmed cell death 6. (292 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (767 aa)
SEC24ASEC24 homolog A, COPII coat complex component. (1133 aa)
SEC24CSEC24 homolog C, COPII coat complex component. (1118 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1258 aa)
SEC24DSEC24 homolog D, COPII coat complex component. (1033 aa)
PREBProlactin regulatory element binding. (418 aa)
MIA3MIA SH3 domain ER export factor 3. (1996 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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