11 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POU3F4	POU domain protein. (352 aa)
	CALB1	Calbindin 1. (261 aa)
	JAG1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1211 aa)
	UMOD	Uromodulin. (642 aa)
	PKD2	Polycystin 2, transient receptor potential cation channel. (970 aa)
	POU3F3	POU domain, class 3, transcription factor 3; Transcription factor that acts synergistically with SOX11 and SOX4. Plays a role in neuronal development. Is implicated in an enhancer activity at the embryonic met-mesencephalic junction; the enhancer element contains the octamer motif (5'-ATTTGCAT-3') (By similarity); Belongs to the POU transcription factor family. Class-3 subfamily. (501 aa)
	TFAP2B	Transcription factor AP-2 beta. (469 aa)
	NOTCH1	Neurogenic locus notch homolog protein 1 preproprotein. (2560 aa)
	KLHL3	Kelch like family member 3. (601 aa)
	PKD1	Polycystin 1, transient receptor potential channel interacting. (4383 aa)
	A0A5G2QXZ6_PIG	Protein kinase domain-containing protein. (408 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5G2QXZ6_PIG	KLHL3	ENSSSCP00000066819	ENSSSCP00000051511	Protein kinase domain-containing protein.	Kelch like family member 3.	0.872
JAG1	NOTCH1	ENSSSCP00000007530	ENSSSCP00000050060	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Neurogenic locus notch homolog protein 1 preproprotein.	0.998
KLHL3	A0A5G2QXZ6_PIG	ENSSSCP00000051511	ENSSSCP00000066819	Kelch like family member 3.	Protein kinase domain-containing protein.	0.872
NOTCH1	JAG1	ENSSSCP00000050060	ENSSSCP00000007530	Neurogenic locus notch homolog protein 1 preproprotein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.998
PKD1	PKD2	ENSSSCP00000062744	ENSSSCP00000009827	Polycystin 1, transient receptor potential channel interacting.	Polycystin 2, transient receptor potential cation channel.	0.998
PKD2	PKD1	ENSSSCP00000009827	ENSSSCP00000062744	Polycystin 2, transient receptor potential cation channel.	Polycystin 1, transient receptor potential channel interacting.	0.998