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MESP1 MESP1 CCDC88C CCDC88C GSK3A GSK3A APOE APOE RUVBL2 RUVBL2 FUZ FUZ DRAXIN DRAXIN FOXO3 FOXO3 TLE3 TLE3 INVS INVS DAB2IP DAB2IP RAPGEF1 RAPGEF1 CTHRC1 CTHRC1 FZD6 FZD6 SOX17 SOX17 DKK4 DKK4 FERMT1 FERMT1 SFRP2 SFRP2 TMEM131L TMEM131L KREMEN1 KREMEN1 DKK1 DKK1 SFRP5 SFRP5 TCF7L2 TCF7L2 RBMS3 RBMS3 LIMD1 LIMD1 WWTR1 WWTR1 CTNND1 CTNND1 STK11 STK11 EGR1 EGR1 SHH SHH GLI3 GLI3 ISL1 ISL1 SOX9 SOX9 WNT11 WNT11 I3L6Y1_PIG I3L6Y1_PIG OTUD5 OTUD5 AMER2 AMER2 HDAC1 HDAC1 PTPRO PTPRO NPHP4 NPHP4 MAD2L2 MAD2L2 LZTS2 LZTS2 SFRP1 SFRP1 AMER1 AMER1 GPC3 GPC3 CAV1 CAV1 CTNNB1 CTNNB1 TLE4 TLE4 TMEM88 TMEM88 G3BP1 G3BP1 NOTUM NOTUM DKKL1 DKKL1 JADE1 JADE1 LMBR1L LMBR1L SOX10 SOX10 CHD8 CHD8 TMEM170B TMEM170B BMP2 BMP2 APC2 APC2 BICC1 BICC1 NKD1 NKD1 SNAI2 SNAI2 APC APC WNT5A WNT5A GREM1 GREM1 SFRP4 SFRP4 TLE5 TLE5 DAB2 DAB2 CYLD CYLD CTNNBIP1 CTNNBIP1 LRP4 LRP4 AMFR AMFR PRICKLE1 PRICKLE1 FRZB FRZB ANKRD6 ANKRD6 DDIT3 DDIT3 LATS1 LATS1 TLE1 TLE1 DKK2 DKK2 SOST SOST GSK3B GSK3B SIAH2 SIAH2 STK3 STK3 NOTCH1 NOTCH1 SDHAF2 SDHAF2 SCYL2 SCYL2 NOG NOG SHISA3 SHISA3 LATS2 LATS2 NPHP3 NPHP3 AXIN2 AXIN2 TNN TNN DACT1 DACT1 PTPRU PTPRU GLI1 GLI1 MLLT3 MLLT3 SOX13 SOX13 FZD4 FZD4 CSNK1A1 CSNK1A1 PRKN PRKN NKD2 NKD2 FRMD8 FRMD8 DKK3 DKK3 UBAC2 UBAC2 PFDN5 PFDN5 TPBG TPBG SOSTDC1 SOSTDC1 SLC9A3R1 SLC9A3R1 TLE2 TLE2 EMD EMD MCC MCC STK4 STK4 AXIN1 AXIN1 TLE7 TLE7 DACT3 DACT3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MESP1Mesoderm posterior bHLH transcription factor 1. (256 aa)
CCDC88CCoiled-coil domain containing 88C. (1906 aa)
GSK3AProtein kinase domain-containing protein. (566 aa)
APOEApolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] (292 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (525 aa)
FUZFuzzy planar cell polarity protein. (418 aa)
DRAXINDraxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord. Inhibits the stabilization of cytosolic beta-catenin (CTNNB1) via its interaction with LRP6, thereby acting as an antagonist of Wnt signaling pathway. (416 aa)
FOXO3Forkhead box protein O3 isoform X1. (672 aa)
TLE3TLE family member 3, transcriptional corepressor. (808 aa)
INVSInversin. (1076 aa)
DAB2IPDAB2 interacting protein. (1196 aa)
RAPGEF1Rap guanine nucleotide exchange factor 1. (1093 aa)
CTHRC1Collagen triple helix repeat containing 1. (244 aa)
FZD6Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (711 aa)
SOX17SRY-box transcription factor 17. (407 aa)
DKK4Dickkopf WNT signaling pathway inhibitor 4. (223 aa)
FERMT1Fermitin family member 1. (676 aa)
SFRP2Uncharacterized protein. (294 aa)
TMEM131LTransmembrane 131 like. (1682 aa)
KREMEN1Kremen protein; Receptor for Dickkopf proteins. Cooperates with DKK1/2 to inhibit Wnt/beta-catenin signaling by promoting the endocytosis of Wnt receptors LRP5 and LRP6. (464 aa)
DKK1Dickkopf_N domain-containing protein. (357 aa)
SFRP5Uncharacterized protein. (315 aa)
TCF7L2Transcription factor 7 like 2. (669 aa)
RBMS3RNA binding motif single stranded interacting protein 3. (458 aa)
LIMD1LIM domain-containing protein 1. (671 aa)
WWTR1WW domain containing transcription regulator 1. (398 aa)
CTNND1Catenin delta 1. (940 aa)
STK11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
EGR1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (542 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (440 aa)
GLI3GLI family zinc finger 3. (1586 aa)
ISL1Insulin gene enhancer protein ISL-1. (349 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (536 aa)
I3L6Y1_PIGWD_REPEATS_REGION domain-containing protein. (391 aa)
OTUD5OTU deubiquitinase 5. (571 aa)
AMER2APC membrane recruitment protein 2. (533 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (491 aa)
PTPROProtein tyrosine phosphatase receptor type O. (1186 aa)
NPHP4Nephrocystin 4. (1466 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
LZTS2Leucine zipper putative tumor suppressor 2; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. May negatively regulate axonal outgrowth by preventing the formation of microtubule bundles that are necessary for transport within the elongating axon. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta- catenin. (667 aa)
SFRP1Secreted frizzled-related protein 1. (308 aa)
AMER1APC membrane recruitment protein 1. (1108 aa)
GPC3Glypican-3 isoform 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (579 aa)
CAV1Caveolin-1; May act as a scaffolding protein within caveolar membranes. Forms a stable heterooligomeric complex with CAV2 that targets to lipid rafts and drives caveolae formation. Mediates the recruitment of CAVIN proteins (CAVIN1/2/3/4) to the caveolae (By similarity). Interacts directly with G-protein alpha subunits and can functionally regulate their activity (By similarity). Involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Its binding to DPP4 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependen [...] (177 aa)
CTNNB1Catenin beta 1. (808 aa)
TLE4TLE family member 4, transcriptional corepressor. (774 aa)
TMEM88Transmembrane protein 88. (168 aa)
G3BP1G3BP stress granule assembly factor 1. (495 aa)
NOTUMNotum, palmitoleoyl-protein carboxylesterase. (570 aa)
DKKL1Dickkopf-like protein 1 isoform X2. (233 aa)
JADE1Jade family PHD finger 1. (857 aa)
LMBR1LLimb development membrane protein 1 like; Belongs to the LIMR family. (524 aa)
SOX10Transcription factor SOX-10; Transcription factor that plays a central role in developing and mature glia. Specifically activates expression of myelin genes, during oligodendrocyte (OL) maturation, such as DUSP15 and MYRF, thereby playing a central role in oligodendrocyte maturation and CNS myelination. Once induced, MYRF cooperates with SOX10 to implement the myelination program. Transcriptional activator of MITF, acting synergistically with PAX3 (By similarity). (542 aa)
CHD8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2583 aa)
TMEM170BTransmembrane protein 170B. (132 aa)
BMP2Bone morphogenetic protein 2 preproprotein. (395 aa)
APC2Uncharacterized protein. (2292 aa)
BICC1BicC family RNA binding protein 1. (1086 aa)
NKD1NKD inhibitor of WNT signaling pathway 1. (482 aa)
SNAI2Snail family transcriptional repressor 2. (268 aa)
APCAPC_basic domain-containing protein. (2713 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
GREM1Gremlin 1, DAN family BMP antagonist. (240 aa)
SFRP4Secreted frizzled-related protein 4. (346 aa)
TLE5TLE family member 5, transcriptional modulator. (197 aa)
DAB2DAB adaptor protein 2. (769 aa)
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (955 aa)
CTNNBIP1Beta-catenin-interacting protein 1. (81 aa)
LRP4LDL receptor related protein 4. (1918 aa)
AMFRAutocrine motility factor receptor. (731 aa)
PRICKLE1Prickle planar cell polarity protein 1. (856 aa)
FRZBSecreted frizzled-related protein 3. (325 aa)
ANKRD6Ankyrin repeat domain-containing protein 6 isoform X2. (727 aa)
DDIT3DNA-damage-inducible transcript 3. (167 aa)
LATS1Large tumor suppressor kinase 1. (1146 aa)
TLE1TLE family member 1, transcriptional corepressor. (770 aa)
DKK2Dickkopf WNT signaling pathway inhibitor 2. (259 aa)
SOSTSclerostin. (212 aa)
GSK3BGlycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (414 aa)
SIAH2E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (324 aa)
STK3Serine/threonine kinase 3. (542 aa)
NOTCH1Neurogenic locus notch homolog protein 1 preproprotein. (2560 aa)
SDHAF2Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer. (172 aa)
SCYL2SCY1 like pseudokinase 2. (934 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
SHISA3Shisa family member 3. (337 aa)
LATS2Serine/threonine-protein kinase LATS2 isoform X1. (1041 aa)
NPHP3TPR_REGION domain-containing protein. (1368 aa)
AXIN2Axin-2. (843 aa)
TNNTenascin N. (1472 aa)
DACT1Dishevelled binding antagonist of beta catenin 1. (807 aa)
PTPRUProtein tyrosine phosphatase receptor type U. (1446 aa)
GLI1Zinc finger protein GLI1 isoform X1. (1106 aa)
MLLT3MLLT3 super elongation complex subunit. (624 aa)
SOX13SRY-box transcription factor 13. (676 aa)
FZD4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (536 aa)
CSNK1A1Casein kinase I isoform alpha; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May phosphorylate PER1 and PER2. May play a role in segregating chromosomes during mitosis. May play a role in keratin cytoskeleton disassembly and thereby, it may regulate epithelial cell migration. (359 aa)
PRKNE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (461 aa)
NKD2Uncharacterized protein. (611 aa)
FRMD8FERM domain containing 8. (477 aa)
DKK3Dickkopf WNT signaling pathway inhibitor 3. (433 aa)
UBAC2UBA domain containing 2. (373 aa)
PFDN5Prefoldin subunit 5. (109 aa)
TPBGTrophoblast glycoprotein. (419 aa)
SOSTDC1Sclerostin domain containing 1. (229 aa)
SLC9A3R1Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (365 aa)
TLE2TLE family member 2, transcriptional corepressor. (750 aa)
EMDLEM domain-containing protein. (400 aa)
MCCMCC regulator of WNT signaling pathway. (982 aa)
STK4Serine/threonine kinase 4. (502 aa)
AXIN1Axin 1. (867 aa)
TLE7TLE family member 7. (433 aa)
DACT3Dishevelled binding antagonist of beta catenin 3. (741 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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