STRINGSTRING
CTTN CTTN VPS13C VPS13C PRKN PRKN HIF1A HIF1A TP53 TP53 PARL PARL VDAC1 VDAC1 RNF41 RNF41 FBXW7 FBXW7 TIGAR TIGAR FBXW9 FBXW9 AMBRA1 AMBRA1 HTT HTT PINK1 PINK1 VPS13D VPS13D GSK3A GSK3A FBXO7 FBXO7 TSPO TSPO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CTTNCortactin. (685 aa)
VPS13CVacuolar protein sorting 13 homolog C. (3757 aa)
PRKNE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (461 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform 1. (824 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (442 aa)
PARLRhomboid domain-containing protein. (502 aa)
VDAC1Voltage-dependent anion-selective channel protein 1; Forms a channel through the mitochondrial outer membrane and also the plasma membrane. The channel at the outer mitochondrial membrane allows diffusion of small hydrophilic molecules; in the plasma membrane it is involved in cell volume regulation and apoptosis. It adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective. May participate in the formation of the permeability transition p [...] (302 aa)
RNF41E3 ubiquitin-protein ligase NRDP1 isoform 1. (317 aa)
FBXW7F-box and WD repeat domain containing 7. (779 aa)
TIGARTP53 induced glycolysis regulatory phosphatase. (269 aa)
FBXW9F-box and WD repeat domain containing 9. (458 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1 isoform X1. (1296 aa)
HTTHuntingtin. (3138 aa)
PINK1PTEN induced kinase 1. (588 aa)
VPS13DVacuolar protein sorting 13 homolog D. (4389 aa)
GSK3AProtein kinase domain-containing protein. (566 aa)
FBXO7F-box protein 7. (606 aa)
TSPOTranslocator protein; Promotes the transport of cholesterol across mitochondrial membranes and may play a role in lipid metabolism, but its precise physiological role is controversial. It is apparently not required for steroid hormone biosynthesis. Can bind protoporphyrin IX and may play a role in the transport of porphyrins and heme. Was initially identified as peripheral-type benzodiazepine receptor; can also bind isoquinoline carboxamides (By similarity); Belongs to the TspO/BZRP family. (169 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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