STRINGSTRING
BCLAF1 BCLAF1 MGMT MGMT KMT5B KMT5B A0A287BQB1_PIG A0A287BQB1_PIG KMT5C KMT5C RPS3 RPS3 UBE2V2 UBE2V2 MAP3K20 MAP3K20 A0A5G2R3X2_PIG A0A5G2R3X2_PIG KAT5 KAT5 ING4 ING4 A0A5G2QSK7_PIG A0A5G2QSK7_PIG BCL7A BCL7A PNKP PNKP BRCC3 BRCC3 EGFR EGFR WDR48 WDR48 A0A5G2R3D3_PIG A0A5G2R3D3_PIG SPRED1 SPRED1 A0A5G2QVU0_PIG A0A5G2QVU0_PIG A0A5G2R4M1_PIG A0A5G2R4M1_PIG NFRKB NFRKB ERCC8 ERCC8 A0A5G2RES6_PIG A0A5G2RES6_PIG MFSD11 MFSD11 ENSSSCP00000073725 ENSSSCP00000073725 SHLD1 SHLD1 BCL7C BCL7C RNF168 RNF168 A0A5G2RGJ5_PIG A0A5G2RGJ5_PIG MYC MYC MCRS1 MCRS1 TIMELESS TIMELESS ACRBP ACRBP SPIRE2 SPIRE2 RUVBL2 RUVBL2 PRKCG PRKCG TFPT TFPT EYA3 EYA3 KHDC3L KHDC3L OOEP OOEP INO80 INO80 ENDOG ENDOG PRKDC PRKDC POGZ POGZ BCL7B BCL7B NPAS2 NPAS2 FAM178B FAM178B ABRAXAS1 ABRAXAS1 HELQ HELQ CCAR2 CCAR2 PBK PBK SIRT1 SIRT1 ERCC6 ERCC6 MMS19 MMS19 NSMCE4A NSMCE4A UCHL5 UCHL5 ACTR8 ACTR8 ATR ATR SKIL SKIL ACTL6A ACTL6A MORF4L2 MORF4L2 RAD9A RAD9A SIRT6 SIRT6 HDGFL2 HDGFL2 MRNIP MRNIP SLF1 SLF1 ATM ATM EPC2 EPC2 RIF1 RIF1 FGF10 FGF10 MBTD1 MBTD1 WRAP53 WRAP53 FXR2 FXR2 SMCHD1 SMCHD1 RUVBL1 RUVBL1 EP400 EP400 FBH1 FBH1 TIGAR TIGAR BRD8 BRD8 PARP1 PARP1 HIC1 HIC1 FXR1 FXR1 PARP3 PARP3 HDAC10 HDAC10 MAD2L2 MAD2L2 UIMC1 UIMC1 DTX3L DTX3L PMAIP1 PMAIP1 FANCB FANCB DHX9 DHX9 FMR1 FMR1 PLA2R1 PLA2R1 FUS FUS ZNHIT1 ZNHIT1 YY1 YY1 EYA2 EYA2 SHLD2 SHLD2 RBBP8 RBBP8 RAD51AP1 RAD51AP1 BABAM1 BABAM1 ANKLE1 ANKLE1 BRCA1 BRCA1 TRIM28 TRIM28 XRCC1 XRCC1 ACTB ACTB EPC1 EPC1 A0A286ZVL9_PIG A0A286ZVL9_PIG EEF1E1 EEF1E1 INO80E INO80E PAXIP1 PAXIP1 YEATS4 YEATS4 EYA1 EYA1 ARID2 ARID2 MEAF6 MEAF6 ING3 ING3 SPIRE1 SPIRE1 PIAS4 PIAS4 PCNA PCNA CEBPG CEBPG A0A287AFM3_PIG A0A287AFM3_PIG FOXM1 FOXM1 FAM168A FAM168A TMEM161A TMEM161A ANKRD1 ANKRD1 TTI2 TTI2 EYA4 EYA4 SELENOK SELENOK FH FH INO80D INO80D SPIDR SPIDR CCDC117 CCDC117 DMAP1 DMAP1 WAS WAS VPS72 VPS72 NSMCE1 NSMCE1 PARP9 PARP9 NACC2 NACC2 PRKCD PRKCD BABAM2 BABAM2 ZNF385A ZNF385A SLF2 SLF2 ZCWPW1 ZCWPW1 DDX5 DDX5 NKX3-1 NKX3-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BCLAF1BCL2 associated transcription factor 1. (933 aa)
MGMTO-6-methylguanine-DNA methyltransferase. (265 aa)
KMT5BLysine methyltransferase 5B. (915 aa)
A0A287BQB1_PIGzf-C3HC4 domain-containing protein. (282 aa)
KMT5CLysine methyltransferase 5C. (455 aa)
RPS340S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] (259 aa)
UBE2V2UBIQUITIN_CONJUGAT_2 domain-containing protein. (159 aa)
MAP3K20Mitogen-activated protein kinase kinase kinase 20. (799 aa)
A0A5G2R3X2_PIGReverse transcriptase domain-containing protein. (774 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (576 aa)
ING4Inhibitor of growth family member 4. (277 aa)
A0A5G2QSK7_PIGReverse transcriptase domain-containing protein. (680 aa)
BCL7ABAF chromatin remodeling complex subunit BCL7A. (260 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (578 aa)
BRCC3BRCA1/BRCA2-containing complex subunit 3. (316 aa)
EGFRReceptor protein-tyrosine kinase. (1205 aa)
WDR48WD repeat domain 48. (740 aa)
A0A5G2R3D3_PIGReverse transcriptase domain-containing protein. (1014 aa)
SPRED1Sprouty related EVH1 domain containing 1. (445 aa)
A0A5G2QVU0_PIGReverse transcriptase domain-containing protein. (742 aa)
A0A5G2R4M1_PIGReverse transcriptase domain-containing protein. (784 aa)
NFRKBNuclear factor related to kappaB binding protein. (1333 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
A0A5G2RES6_PIGReverse transcriptase domain-containing protein. (356 aa)
MFSD11Major facilitator superfamily domain containing 11. (491 aa)
ENSSSCP00000073725annotation not available (332 aa)
SHLD1Shieldin complex subunit 1. (276 aa)
BCL7CBAF chromatin remodeling complex subunit BCL7C. (243 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (575 aa)
A0A5G2RGJ5_PIGUncharacterized protein. (102 aa)
MYCMyc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). (452 aa)
MCRS1Microspherule protein 1. (487 aa)
TIMELESSTimeless circadian regulator. (1206 aa)
ACRBPAcrosin-binding protein; May be involved in packaging and condensation of the acrosin zymogen in the acrosomal matrix via its association with proacrosin. (539 aa)
SPIRE2Spire type actin nucleation factor 2. (763 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (525 aa)
PRKCGProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (759 aa)
TFPTTCF3 fusion partner isoform 1. (253 aa)
EYA3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (573 aa)
KHDC3LMOEP19 domain-containing protein. (142 aa)
OOEPOocyte-expressed protein homolog. (148 aa)
INO80INO80 complex ATPase subunit. (1566 aa)
ENDOGEndonuclease. (299 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4136 aa)
POGZPogo transposable element with ZNF domain isoform X1. (1412 aa)
BCL7BBAF chromatin remodeling complex subunit BCL7B. (249 aa)
NPAS2Neuronal PAS domain protein 2. (796 aa)
FAM178BUncharacterized protein. (569 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (405 aa)
HELQHelicase, POLQ like. (1076 aa)
CCAR2DBC1 domain-containing protein. (916 aa)
PBKLymphokine-activated killer T-cell-originated protein kinase isoform X1. (322 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1 isoform a. (742 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1462 aa)
MMS19MMS19 homolog, cytosolic iron-sulfur assembly component. (1039 aa)
NSMCE4ANon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (382 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase isozyme L5; Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via ADRM1 (By similarity). (327 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2643 aa)
SKILSki-like protein isoform X1. (661 aa)
ACTL6AActin-like protein 6A isoform X1; Belongs to the actin family. (429 aa)
MORF4L2Mortality factor 4 like 2. (288 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (443 aa)
SIRT6Deacetylase sirtuin-type domain-containing protein. (327 aa)
HDGFL2HDGF like 2. (667 aa)
MRNIPUncharacterized protein. (216 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1055 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and monospec [...] (3057 aa)
EPC2Enhancer of polycomb homolog. (807 aa)
RIF1Replication timing regulatory factor 1. (2466 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (211 aa)
MBTD1Mbt domain containing 1. (715 aa)
WRAP53WD repeat containing antisense to TP53. (539 aa)
FXR2FMR1 autosomal homolog 2. (667 aa)
SMCHD1Structural maintenance of chromosomes flexible hinge domain containing 1. (1997 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
EP400E1A binding protein p400. (3210 aa)
FBH1F-box DNA helicase 1 isoform X1. (1045 aa)
TIGARTP53 induced glycolysis regulatory phosphatase. (269 aa)
BRD8Bromodomain containing 8. (1236 aa)
PARP1Poly [ADP-ribose] polymerase. (1017 aa)
HIC1Hypermethylated in cancer 1 protein isoform 2. (733 aa)
FXR1Fragile X mental retardation syndrome-related protein 1 isoform X1. (677 aa)
PARP3Poly [ADP-ribose] polymerase. (539 aa)
HDAC10Histone deacetylase 10. (671 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
UIMC1BRCA1-A complex subunit RAP80; Ubiquitin-binding protein. Specifically recognizes and binds 'Lys-63'-linked ubiquitin. Plays a central role in the BRCA1-A complex by specifically binding 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX. Also weakly binds monoubiquitin but with much less affinity than 'Lys-63'-linked ubiquitin. M [...] (622 aa)
DTX3LDeltex E3 ubiquitin ligase 3L. (737 aa)
PMAIP1Uncharacterized protein. (121 aa)
FANCBFA complementation group B. (855 aa)
DHX9ATP-dependent RNA helicase A. (1384 aa)
FMR1Fragile X mental retardation protein 1. (632 aa)
PLA2R1Phospholipase A2 receptor 1. (1435 aa)
FUSFUS RNA binding protein. (518 aa)
ZNHIT1Zinc finger HIT-type containing 1. (154 aa)
YY1YY1 transcription factor. (438 aa)
EYA2Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (583 aa)
SHLD2Shieldin complex subunit 2. (907 aa)
RBBP8RB binding protein 8, endonuclease. (897 aa)
RAD51AP1RAD51 associated protein 1. (345 aa)
BABAM1BRISC and BRCA1 A complex member 1. (332 aa)
ANKLE1Ankyrin repeat and LEM domain containing 1. (503 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1865 aa)
TRIM28Tripartite motif containing 28. (868 aa)
XRCC1X-ray repair cross complementing 1. (617 aa)
ACTBActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
EPC1Enhancer of polycomb homolog. (841 aa)
A0A286ZVL9_PIGRING-type domain-containing protein. (137 aa)
EEF1E1Eukaryotic translation elongation factor 1 epsilon-1 isoform 1. (174 aa)
INO80EINO80 complex subunit E isoform 1. (244 aa)
PAXIP1PAX interacting protein 1. (1030 aa)
YEATS4YEATS domain containing 4. (227 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (618 aa)
ARID2AT-rich interaction domain 2. (1833 aa)
MEAF6MYST/Esa1 associated factor 6. (216 aa)
ING3Inhibitor of growth protein. (418 aa)
SPIRE1Spire type actin nucleation factor 1. (802 aa)
PIAS4Protein inhibitor of activated STAT 4. (566 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (270 aa)
CEBPGCCAAT enhancer binding protein gamma. (164 aa)
A0A287AFM3_PIGReverse transcriptase domain-containing protein. (831 aa)
FOXM1Forkhead box M1. (766 aa)
FAM168AFamily with sequence similarity 168 member A. (234 aa)
TMEM161ATransmembrane protein 161A. (479 aa)
ANKRD1Ankyrin repeat domain-containing protein 1; May play an important role in endothelial cell activation. May act as a nuclear transcription factor that negatively regulates the expression of cardiac genes (By similarity). (339 aa)
TTI2TELO2 interacting protein 2. (507 aa)
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (645 aa)
SELENOKSelenoprotein K; Required for Ca(2+) flux in immune cells and plays a role in T-cell proliferation and in T-cell and neutrophil migration (By similarity). Involved in endoplasmic reticulum-associated degradation (ERAD) of soluble glycosylated proteins (By similarity). Required for palmitoylation and cell surface expression of CD36 and involved in macrophage uptake of low-density lipoprotein and in foam cell formation (By similarity). Together with ZDHHC6, required for palmitoylation of ITPR1 in immune cells, leading to regulate ITPR1 stability and function. Plays a role in protection o [...] (93 aa)
FHFumarate hydratase, mitochondrial; Catalyzes the reversible stereospecific interconversion of fumarate to L-malate. Experiments in different species have demonstrated that specific isoforms of this protein act in defined pathways and favor one direction over the other (Probable). [Isoform Cytoplasmic]: Catalyzes the dehydration of L-malate to fumarate. Fumarate metabolism in the cytosol plays a role during urea cycle and arginine metabolism; fumarate being a by-product of the urea cycle and amino-acid catabolism (By similarity). Also plays a role in DNA repair by promoting non-homolog [...] (466 aa)
INO80DINO80 complex subunit D. (1028 aa)
SPIDRDNA repair-scaffolding protein isoform 1. (924 aa)
CCDC117Coiled-coil domain containing 117. (279 aa)
DMAP1DNA methyltransferase 1-associated protein 1 isoform X1. (468 aa)
WASWASP actin nucleation promoting factor. (500 aa)
VPS72Vacuolar protein sorting-associated protein 72 homolog isoform 2. (364 aa)
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (324 aa)
PARP9Poly(ADP-ribose) polymerase family member 9. (847 aa)
NACC2NACC family member 2. (588 aa)
PRKCDProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (723 aa)
BABAM2BRISC and BRCA1 A complex member 2. (383 aa)
ZNF385AZinc finger protein 385A. (406 aa)
SLF2SMC5-SMC6 complex localization factor 2. (1169 aa)
ZCWPW1Zinc finger CW-type and PWWP domain containing 1. (653 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (617 aa)
NKX3-1Homeobox protein Nkx-3.1 isoform 1. (247 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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