22 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPS10	Mitochondrial ribosomal protein S10. (206 aa)
	MRPS27	Mitochondrial ribosomal protein S27. (455 aa)
	MRPS25	Interferon alpha-inducible protein 6. (173 aa)
	DAP3	Death associated protein 3. (410 aa)
	MRPS7	28S ribosomal protein S7, mitochondrial. (242 aa)
	MRPS11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (196 aa)
	MRPS21	28S ribosomal protein S21, mitochondrial. (87 aa)
	MRPS23	Mitochondrial ribosomal protein S23. (207 aa)
	MRPS28	28S ribosomal protein S28, mitochondrial. (188 aa)
	MRPS35	MRP-S28 domain-containing protein. (506 aa)
	MRPS24	28S ribosomal protein S24, mitochondrial. (167 aa)
	MRPS34	Uncharacterized protein. (505 aa)
	MRPS12	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (152 aa)
	PPP1R26	Protein phosphatase 1 regulatory subunit 26. (1170 aa)
	MRPS31	Mitochondrial ribosomal protein S31. (395 aa)
	MRPS5	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (469 aa)
	MRPS26	28S ribosomal protein S26, mitochondrial. (205 aa)
	MRPS2	Mitochondrial ribosomal protein S2. (410 aa)
	MRPS16	28S ribosomal protein S16, mitochondrial. (135 aa)
	MRPS33	Mitochondrial ribosomal protein S33. (148 aa)
	MRPS6	Uncharacterized protein. (276 aa)
	MRPS18B	28S ribosomal protein S18b, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily. (258 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	MRPS10	ENSSSCP00000026901	ENSSSCP00000070930	Death associated protein 3.	Mitochondrial ribosomal protein S10.	0.999
DAP3	MRPS11	ENSSSCP00000026901	ENSSSCP00000031627	Death associated protein 3.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.998
DAP3	MRPS12	ENSSSCP00000026901	ENSSSCP00000048919	Death associated protein 3.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.998
DAP3	MRPS16	ENSSSCP00000026901	ENSSSCP00000073451	Death associated protein 3.	28S ribosomal protein S16, mitochondrial.	0.998
DAP3	MRPS18B	ENSSSCP00000026901	ENSSSCP00000024944	Death associated protein 3.	28S ribosomal protein S18b, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily.	0.992
DAP3	MRPS2	ENSSSCP00000026901	ENSSSCP00000074362	Death associated protein 3.	Mitochondrial ribosomal protein S2.	0.995
DAP3	MRPS21	ENSSSCP00000026901	ENSSSCP00000033064	Death associated protein 3.	28S ribosomal protein S21, mitochondrial.	0.987
DAP3	MRPS23	ENSSSCP00000026901	ENSSSCP00000042362	Death associated protein 3.	Mitochondrial ribosomal protein S23.	0.993
DAP3	MRPS24	ENSSSCP00000026901	ENSSSCP00000045738	Death associated protein 3.	28S ribosomal protein S24, mitochondrial.	0.984
DAP3	MRPS25	ENSSSCP00000026901	ENSSSCP00000065116	Death associated protein 3.	Interferon alpha-inducible protein 6.	0.995
DAP3	MRPS26	ENSSSCP00000026901	ENSSSCP00000007627	Death associated protein 3.	28S ribosomal protein S26, mitochondrial.	0.987
DAP3	MRPS27	ENSSSCP00000026901	ENSSSCP00000069385	Death associated protein 3.	Mitochondrial ribosomal protein S27.	0.999
DAP3	MRPS28	ENSSSCP00000026901	ENSSSCP00000043398	Death associated protein 3.	28S ribosomal protein S28, mitochondrial.	0.992
DAP3	MRPS31	ENSSSCP00000026901	ENSSSCP00000064346	Death associated protein 3.	Mitochondrial ribosomal protein S31.	0.994
DAP3	MRPS33	ENSSSCP00000026901	ENSSSCP00000014318	Death associated protein 3.	Mitochondrial ribosomal protein S33.	0.980
DAP3	MRPS34	ENSSSCP00000026901	ENSSSCP00000048030	Death associated protein 3.	Uncharacterized protein.	0.988
DAP3	MRPS35	ENSSSCP00000026901	ENSSSCP00000044070	Death associated protein 3.	MRP-S28 domain-containing protein.	0.998
DAP3	MRPS5	ENSSSCP00000026901	ENSSSCP00000072994	Death associated protein 3.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
DAP3	MRPS6	ENSSSCP00000026901	ENSSSCP00000022487	Death associated protein 3.	Uncharacterized protein.	0.998
DAP3	MRPS7	ENSSSCP00000026901	ENSSSCP00000031553	Death associated protein 3.	28S ribosomal protein S7, mitochondrial.	0.999