STRINGSTRING
NOB1 NOB1 NOP9 NOP9 IMP3 IMP3 UTP20 UTP20 EIF6 EIF6 CMSS1 CMSS1 RRP15 RRP15 PWP2 PWP2 RRP7A RRP7A UTP4 UTP4 NSA2 NSA2 WDR46 WDR46 LTV1 LTV1 KRR1 KRR1 TSR1 TSR1 RIOK2 RIOK2 RIOK3 RIOK3 MAK16 MAK16 FCF1 FCF1 RRP1 RRP1 UTP6 UTP6 RIOK1 RIOK1 WDR36 WDR36 NOL10 NOL10 MRTO4 MRTO4 FAM207A FAM207A UTP23 UTP23 EMG1 EMG1 BMS1 BMS1 NOC2L NOC2L HUNK HUNK UTP3 UTP3 NOP58 NOP58 PIN4 PIN4 RSL24D1 RSL24D1 FBL FBL UTP18 UTP18 WDR12 WDR12 IMP4 IMP4 UTP14A UTP14A NOL6 NOL6 PES1 PES1 NOC4L NOC4L NOP14 NOP14 WDR3 WDR3 MPHOSPH10 MPHOSPH10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (413 aa)
NOP9NOP9 nucleolar protein. (637 aa)
IMP3S4 RNA-binding domain-containing protein. (184 aa)
UTP20UTP20 small subunit processome component. (2781 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (246 aa)
CMSS1Cms1 ribosomal small subunit homolog. (279 aa)
RRP15Ribosomal RNA processing 15 homolog. (303 aa)
PWP2Uncharacterized protein. (1096 aa)
RRP7ARibosomal RNA processing 7 homolog A. (412 aa)
UTP4U3 small nucleolar RNA-associated protein 4 homolog isoform 1. (686 aa)
NSA2Ribosome biogenesis protein NSA2 homolog isoform 1. (260 aa)
WDR46WD repeat-containing protein 46 isoform 1. (656 aa)
LTV1LTV1 ribosome biogenesis factor. (475 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (375 aa)
TSR1TSR1 ribosome maturation factor. (763 aa)
RIOK2RIO domain-containing protein. (190 aa)
RIOK3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
MAK16Protein MAK16 homolog; Belongs to the MAK16 family. (297 aa)
FCF1FCF1 rRNA-processing protein. (198 aa)
RRP1Ribosomal RNA processing protein 1 homolog A. (447 aa)
UTP6UTP6 small subunit processome component. (598 aa)
RIOK1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (565 aa)
WDR36WD repeat domain 36. (895 aa)
NOL10Nucleolar protein 10 isoform 1. (688 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (272 aa)
FAM207AUncharacterized protein. (266 aa)
UTP23UTP23 small subunit processome component. (251 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform 1. (244 aa)
BMS1BMS1 ribosome biogenesis factor. (1284 aa)
NOC2LNOC2 like nucleolar associated transcriptional repressor. (713 aa)
HUNKHormonally up-regulated Neu-associated kinase. (714 aa)
UTP3Sas10 domain-containing protein. (474 aa)
NOP58NOP58 ribonucleoprotein. (546 aa)
PIN4Peptidyl-prolyl cis-trans isomerase. (131 aa)
RSL24D1Ribosomal L24 domain containing 1. (163 aa)
FBLFibrillarin. (321 aa)
UTP18U3 small nucleolar RNA-associated protein 18 homolog. (572 aa)
WDR12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
IMP4U3 small nucleolar ribonucleoprotein IMP4 isoform a. (291 aa)
UTP14AUncharacterized protein. (773 aa)
NOL6Nucleolar protein 6. (1145 aa)
PES1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (597 aa)
NOC4LNucleolar complex associated 4 homolog. (543 aa)
NOP14NOP14 nucleolar protein. (852 aa)
WDR3WD repeat domain 3. (943 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (680 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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