(112 nodes) SWI/SNF superfamily-type complex network (Sus scrofa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GATAD2B	GATA zinc finger domain containing 2B. (620 aa)
	ACTR6	Actin related protein 6; Belongs to the actin family. (396 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1557 aa)
	BCL11B	Uncharacterized protein. (888 aa)
	RUVBL2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (525 aa)
	TFPT	TCF3 fusion partner isoform 1. (253 aa)
	LENG9	Leukocyte receptor cluster member 9 isoform 1. (532 aa)
	CHD5	Chromodomain helicase DNA binding protein 5. (1976 aa)
	PHF10	PHD finger protein 10. (529 aa)
	INO80	INO80 complex ATPase subunit. (1566 aa)
	POLE3	Uncharacterized protein. (171 aa)
	SF3B4	Splicing factor 3b subunit 4. (424 aa)
	ACTR5	Actin-related protein 5; Belongs to the actin family. (608 aa)
	BCL7B	BAF chromatin remodeling complex subunit BCL7B. (249 aa)
	SRCAP	Uncharacterized protein. (3226 aa)
	INO80B	INO80 complex subunit B. (356 aa)
	SMARCB1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
	DDX21	DEAD (Asp-Glu-Ala-Asp) box helicase 21. (784 aa)
	ERCC6	ERCC excision repair 6, chromatin remodeling factor. (1462 aa)
	ACTR8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
	ACTL6A	Actin-like protein 6A isoform X1; Belongs to the actin family. (429 aa)
	MTA2	Metastasis associated 1 family member 2. (628 aa)
	MPND	MPN domain-containing protein isoform 3. (520 aa)
	CHD1	Chromodomain helicase DNA binding protein 1. (1691 aa)
	RSF1	PHD-type domain-containing protein. (1388 aa)
	LOC106504189	Uncharacterized protein. (126 aa)
	F1RZX5_PIG	Uncharacterized protein. (124 aa)
	SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (411 aa)
	ASH1L	ASH1 like histone lysine methyltransferase. (2963 aa)
	BRD7	Bromodomain containing 7. (652 aa)
	DPF1	Double PHD fingers 1. (435 aa)
	RUVBL1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
	EP400	E1A binding protein p400. (3210 aa)
	C17orf64	Chromosome 17 open reading frame 64. (236 aa)
	KRTAP27-1	Keratin associated protein 27-1. (206 aa)
	BRD8	Bromodomain containing 8. (1236 aa)
	LOC100622826	Uncharacterized protein. (211 aa)
	BANF1	Barrier to autointegration factor 1. (89 aa)
	BICRA	BRD4 interacting chromatin remodeling complex associated protein. (1555 aa)
	SGF29	SAGA complex associated factor 29. (328 aa)
	WBP1L	WW domain binding protein 1-like isoform 1. (364 aa)
	I3LQH1_PIG	Uncharacterized protein. (273 aa)
	I3LR68_PIG	Uncharacterized protein. (260 aa)
	SMARCC2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2. (1258 aa)
	MTA3	Metastasis associated 1 family member 3. (593 aa)
	MEGF6	Multiple EGF like domains 6. (1624 aa)
	SMARCA1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1061 aa)
	SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1647 aa)
	ZNHIT1	Zinc finger HIT-type containing 1. (154 aa)
	BAZ1B	Bromodomain adjacent to zinc finger domain 1B. (1483 aa)
	LOC100623393	Uncharacterized protein. (239 aa)
	HMGXB4	HMG-box containing 4. (691 aa)
	LOC106508044	Uncharacterized protein. (157 aa)
	SMARCA5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1003 aa)
	SMARCD3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3. (548 aa)
	A0A286ZU26_PIG	Uncharacterized protein. (132 aa)
	INO80E	INO80 complex subunit E isoform 1. (244 aa)
	A0A286ZXB2_PIG	Uncharacterized protein. (61 aa)
	C12H17orf49	Uncharacterized protein. (195 aa)
	BRD9	Bromodomain containing 9. (714 aa)
	MYBBP1A	MYB binding protein 1a. (1594 aa)
	A0A286ZZR0_PIG	Uncharacterized protein. (218 aa)
	ARID2	AT-rich interaction domain 2. (1833 aa)
	SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1573 aa)
	A0A287A7I5_PIG	Uncharacterized protein. (180 aa)
	CHD4	Uncharacterized protein. (1863 aa)
	A0A287ADF8_PIG	Uncharacterized protein. (110 aa)
	LOC102160031	Uncharacterized protein. (251 aa)
	ARID1B	AT-rich interaction domain 1B. (2378 aa)
	SS18	Uncharacterized protein. (416 aa)
	SMARCC1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1. (1175 aa)
	A0A287ALM4_PIG	Uncharacterized protein. (268 aa)
	LOC100153543	Uncharacterized protein. (908 aa)
	RBBP4	WD_REPEATS_REGION domain-containing protein. (427 aa)
	LOC110256008	Uncharacterized protein. (100 aa)
	SF3B3	Splicing factor 3B subunit 3. (1217 aa)
	LOC110256282	Uncharacterized protein. (105 aa)
	INO80D	INO80 complex subunit D. (1028 aa)
	CECR2	CECR2 histone acetyl-lysine reader. (1291 aa)
	ENSSSCP00000048550	annotation not available (337 aa)
	DMAP1	DNA methyltransferase 1-associated protein 1 isoform X1. (468 aa)
	SS18L1	SS18L1 subunit of BAF chromatin remodeling complex. (416 aa)
	PBRM1	Polybromo 1. (1915 aa)
	ATP6V0B	ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family. (334 aa)
	ATP6V1A	V-type proton ATPase catalytic subunit A; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. In aerobic conditions, involved in intracellular iron homeostasis, thus triggering the activity of Fe(2+) prolyl hydroxylase (PHD) enzymes, and leading to HIF1A hydroxylation and subsequent proteasomal degradation. May play a role in neurite development and synaptic connectivity. Belongs to the ATPase alpha/beta chains family. (618 aa)
	BICRAL	BRD4 interacting chromatin remodeling complex associated protein like. (1113 aa)
	BPTF	Bromodomain PHD finger transcription factor. (2913 aa)
	INO80C	INO80 complex subunit C. (192 aa)
	CFDP1	Craniofacial development protein 1; May play a role during embryogenesis. (299 aa)
	A0A287BCH5_PIG	Uncharacterized protein. (279 aa)
	CHD3	Chromodomain-helicase-DNA-binding protein 3 isoform X1. (1996 aa)
	LOC100517674	Uncharacterized protein. (218 aa)
	ARID1A	AT-rich interaction domain 1A. (2289 aa)
	SMARCD1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (631 aa)
	DPF2	Zinc finger protein ubi-d4 isoform 2. (405 aa)
	WBP1	WW domain binding protein 1. (303 aa)
	BCL11A	BAF chromatin remodeling complex subunit BCL11A. (835 aa)
	CTPS2	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (620 aa)
	DPF3	Double PHD fingers 3. (411 aa)
	DEK	DEK proto-oncogene. (383 aa)
	CHRAC1	Chromatin accessibility complex subunit 1. (134 aa)
	NYNRIN	NYN domain and retroviral integrase containing. (1900 aa)
	MTA1	Metastasis associated 1. (778 aa)
	KRTAP17-1	Keratin associated protein 17-1. (116 aa)
	ENSSSCP00000064877	annotation not available (185 aa)
	KAT5	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (576 aa)
	BCL7A	BAF chromatin remodeling complex subunit BCL7A. (260 aa)
	GATAD2A	GATA zinc finger domain containing 2A. (640 aa)
	NFRKB	Nuclear factor related to kappaB binding protein. (1333 aa)
	SMARCD2	SWIB domain-containing protein. (499 aa)
	BCL7C	BAF chromatin remodeling complex subunit BCL7C. (243 aa)
	RBBP7	RB binding protein 7, chromatin remodeling factor. (469 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZU26_PIG	A0A286ZZR0_PIG	ENSSSCP00000035164	ENSSSCP00000036971	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A286ZU26_PIG	A0A287A7I5_PIG	ENSSSCP00000035164	ENSSSCP00000039774	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A286ZU26_PIG	A0A287ALM4_PIG	ENSSSCP00000035164	ENSSSCP00000044899	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	A0A287BCH5_PIG	ENSSSCP00000035164	ENSSSCP00000054231	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	ENSSSCP00000048550	ENSSSCP00000035164	ENSSSCP00000048550	Uncharacterized protein.	annotation not available	0.802
A0A286ZU26_PIG	F1RZX5_PIG	ENSSSCP00000035164	ENSSSCP00000018496	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A286ZU26_PIG	I3LQH1_PIG	ENSSSCP00000035164	ENSSSCP00000026351	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	I3LR68_PIG	ENSSSCP00000035164	ENSSSCP00000026600	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A286ZU26_PIG	KRTAP17-1	ENSSSCP00000035164	ENSSSCP00000064598	Uncharacterized protein.	Keratin associated protein 17-1.	0.555
A0A286ZU26_PIG	LOC100517674	ENSSSCP00000035164	ENSSSCP00000055621	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A286ZU26_PIG	LOC100622826	ENSSSCP00000035164	ENSSSCP00000023387	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	LOC100623393	ENSSSCP00000035164	ENSSSCP00000032029	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	LOC102160031	ENSSSCP00000035164	ENSSSCP00000042216	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A286ZU26_PIG	LOC106504189	ENSSSCP00000035164	ENSSSCP00000018495	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A286ZU26_PIG	LOC106508044	ENSSSCP00000035164	ENSSSCP00000033217	Uncharacterized protein.	Uncharacterized protein.	0.456
A0A286ZU26_PIG	LOC110256008	ENSSSCP00000035164	ENSSSCP00000046004	Uncharacterized protein.	Uncharacterized protein.	0.745
A0A286ZU26_PIG	LOC110256282	ENSSSCP00000035164	ENSSSCP00000047171	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A286ZU26_PIG	RUVBL1	ENSSSCP00000035164	ENSSSCP00000019846	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.401
A0A286ZXB2_PIG	ACTL6A	ENSSSCP00000036276	ENSSSCP00000012532	Uncharacterized protein.	Actin-like protein 6A isoform X1; Belongs to the actin family.	0.405
A0A286ZXB2_PIG	BCL7A	ENSSSCP00000036276	ENSSSCP00000067351	Uncharacterized protein.	BAF chromatin remodeling complex subunit BCL7A.	0.460