9 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HLA-DRA	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family. (252 aa)
	SLA-DQA1	SLA class II histocompatibility antigen, DQ haplotype D alpha chain. (255 aa)
	SLA-DQB1	SLA class II histocompatibility antigen, DQ haplotype C beta chain. (271 aa)
	SLA-DRB1	Ig-like domain-containing protein. (307 aa)
	A0A287AAB9_PIG	Ig-like domain-containing protein. (252 aa)
	A0A286ZKB7_PIG	Ig-like domain-containing protein. (259 aa)
	SLA-DMA	Ig-like domain-containing protein; Belongs to the MHC class II family. (290 aa)
	SLA-DMB	Major histocompatibility complex, class II, DM beta. (272 aa)
	HLA-DOB	HLA class II histocompatibility antigen, DO beta chain. (277 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZKB7_PIG	A0A287AAB9_PIG	ENSSSCP00000031912	ENSSSCP00000040841	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.552
A0A286ZKB7_PIG	HLA-DOB	ENSSSCP00000031912	ENSSSCP00000001577	Ig-like domain-containing protein.	HLA class II histocompatibility antigen, DO beta chain.	0.579
A0A286ZKB7_PIG	HLA-DRA	ENSSSCP00000031912	ENSSSCP00000001567	Ig-like domain-containing protein.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.874
A0A286ZKB7_PIG	SLA-DMA	ENSSSCP00000031912	ENSSSCP00000030928	Ig-like domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.763
A0A286ZKB7_PIG	SLA-DMB	ENSSSCP00000031912	ENSSSCP00000001591	Ig-like domain-containing protein.	Major histocompatibility complex, class II, DM beta.	0.851
A0A286ZKB7_PIG	SLA-DQA1	ENSSSCP00000031912	ENSSSCP00000070034	Ig-like domain-containing protein.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.866
A0A286ZKB7_PIG	SLA-DQB1	ENSSSCP00000031912	ENSSSCP00000062346	Ig-like domain-containing protein.	SLA class II histocompatibility antigen, DQ haplotype C beta chain.	0.555
A0A286ZKB7_PIG	SLA-DRB1	ENSSSCP00000031912	ENSSSCP00000055121	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.548
A0A287AAB9_PIG	A0A286ZKB7_PIG	ENSSSCP00000040841	ENSSSCP00000031912	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.552
A0A287AAB9_PIG	HLA-DOB	ENSSSCP00000040841	ENSSSCP00000001577	Ig-like domain-containing protein.	HLA class II histocompatibility antigen, DO beta chain.	0.572
A0A287AAB9_PIG	HLA-DRA	ENSSSCP00000040841	ENSSSCP00000001567	Ig-like domain-containing protein.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.874
A0A287AAB9_PIG	SLA-DMA	ENSSSCP00000040841	ENSSSCP00000030928	Ig-like domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.763
A0A287AAB9_PIG	SLA-DMB	ENSSSCP00000040841	ENSSSCP00000001591	Ig-like domain-containing protein.	Major histocompatibility complex, class II, DM beta.	0.851
A0A287AAB9_PIG	SLA-DQA1	ENSSSCP00000040841	ENSSSCP00000070034	Ig-like domain-containing protein.	SLA class II histocompatibility antigen, DQ haplotype D alpha chain.	0.866
A0A287AAB9_PIG	SLA-DQB1	ENSSSCP00000040841	ENSSSCP00000062346	Ig-like domain-containing protein.	SLA class II histocompatibility antigen, DQ haplotype C beta chain.	0.549
A0A287AAB9_PIG	SLA-DRB1	ENSSSCP00000040841	ENSSSCP00000055121	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.546
HLA-DOB	A0A286ZKB7_PIG	ENSSSCP00000001577	ENSSSCP00000031912	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein.	0.579
HLA-DOB	A0A287AAB9_PIG	ENSSSCP00000001577	ENSSSCP00000040841	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein.	0.572
HLA-DOB	HLA-DRA	ENSSSCP00000001577	ENSSSCP00000001567	HLA class II histocompatibility antigen, DO beta chain.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.926
HLA-DOB	SLA-DMA	ENSSSCP00000001577	ENSSSCP00000030928	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.970