57 items (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ICA1	Islet cell autoantigen 1. (572 aa)
	NOSTRIN	Nitric oxide synthase trafficking. (504 aa)
	SRGAP2	Uncharacterized protein. (1087 aa)
	A0A287BPC4_PIG	PX domain-containing protein. (179 aa)
	SNX2	Sorting nexin-2 isoform 1. (525 aa)
	BAIAP2	BAI1 associated protein 2. (575 aa)
	ACAP2	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2. (812 aa)
	ARFIP1	ADP ribosylation factor interacting protein 1. (476 aa)
	SRGAP1	SLIT-ROBO Rho GTPase-activating protein 1 isoform X1. (1085 aa)
	SRGAP3	SLIT-ROBO Rho GTPase activating protein 3. (1074 aa)
	ASAP2	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform a. (1010 aa)
	ASAP1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform 1. (1129 aa)
	BIN1	Bridging integrator 1. (588 aa)
	PACSIN3	Protein kinase C and casein kinase substrate in neurons 3. (501 aa)
	DNMBP	Dynamin binding protein. (1581 aa)
	APPL1	Adaptor protein phosphotyrosine interaction PH domain and leucine zipper containing 1. (708 aa)
	PACSIN2	Protein kinase C and casein kinase substrate in neurons 2. (538 aa)
	ARHGEF37	Rho guanine nucleotide exchange factor 37. (711 aa)
	SNX18	Sorting nexin 18. (807 aa)
	SH3GLB2	SH3 domain containing GRB2 like, endophilin B2. (450 aa)
	FER	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (822 aa)
	ARHGEF38	Rho guanine nucleotide exchange factor 38. (778 aa)
	ARHGAP45	Rho GTPase activating protein 45. (1156 aa)
	TRIP10	Thyroid hormone receptor interactor 10. (602 aa)
	ASAP3	ArfGAP with SH3 domain, ankyrin repeat and PH domain 3. (904 aa)
	ACAP1	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1. (741 aa)
	AMPH	Uncharacterized protein. (678 aa)
	SH3BP1	Uncharacterized protein. (643 aa)
	BIN2	Bridging integrator 2. (512 aa)
	GMIP	GEM interacting protein. (1090 aa)
	FCHO1	FCH domain only 1. (969 aa)
	SH3GL1	SH3 domain containing GRB2 like 1, endophilin A2. (405 aa)
	ARHGAP4	Rho GTPase activating protein 4. (979 aa)
	BAIAP2L1	BAI1 associated protein 2 like 1. (509 aa)
	SNX5	Sorting nexin; Involved in several stages of intracellular trafficking. (404 aa)
	SH3GLB1	SH3 domain containing GRB2 like, endophilin B1. (402 aa)
	FNBP1L	Formin binding protein 1 like. (609 aa)
	ARHGAP29	Rho GTPase-activating protein 29 isoform a. (1260 aa)
	SH3GL2	SH3 domain containing GRB2 like 2, endophilin A1. (352 aa)
	ACAP3	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. (833 aa)
	FAM92B	Family with sequence similarity 92 member B. (293 aa)
	FES	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (822 aa)
	APPL2	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. (668 aa)
	BAIAP2L2	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 isoform X6. (528 aa)
	SNX4	Sorting nexin 4. (511 aa)
	ARHGAP44	Rho GTPase activating protein 44. (812 aa)
	SNX9	Sorting nexin 9. (632 aa)
	OPHN1	Oligophrenin 1. (808 aa)
	SNX32	Sorting nexin; Involved in several stages of intracellular trafficking. (428 aa)
	PSTPIP1	Proline-serine-threonine phosphatase interacting protein 1. (443 aa)
	SNX1	Sorting nexin-1 isoform a. (522 aa)
	SNX6	Sorting nexin; Involved in several stages of intracellular trafficking. (397 aa)
	PACSIN1	Protein kinase C and casein kinase substrate in neurons 1. (376 aa)
	FCHO2	F-BAR domain only protein 2 isoform X1. (809 aa)
	ARHGAP26	Rho GTPase activating protein 26. (734 aa)
	MTSS2	MTSS I-BAR domain containing 2. (860 aa)
	FNBP1	Formin binding protein 1. (616 aa)

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A287BPC4_PIG	BIN1	ENSSSCP00000058367	ENSSSCP00000048190	PX domain-containing protein.	Bridging integrator 1.	0.597
A0A287BPC4_PIG	SNX1	ENSSSCP00000058367	ENSSSCP00000063925	PX domain-containing protein.	Sorting nexin-1 isoform a.	0.782
A0A287BPC4_PIG	SNX2	ENSSSCP00000058367	ENSSSCP00000057658	PX domain-containing protein.	Sorting nexin-2 isoform 1.	0.794
A0A287BPC4_PIG	SNX32	ENSSSCP00000058367	ENSSSCP00000066517	PX domain-containing protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.537
A0A287BPC4_PIG	SNX4	ENSSSCP00000058367	ENSSSCP00000042227	PX domain-containing protein.	Sorting nexin 4.	0.751
A0A287BPC4_PIG	SNX6	ENSSSCP00000058367	ENSSSCP00000043080	PX domain-containing protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.578
ACAP1	APPL1	ENSSSCP00000020781	ENSSSCP00000038724	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1.	Adaptor protein phosphotyrosine interaction PH domain and leucine zipper containing 1.	0.632
ACAP1	APPL2	ENSSSCP00000020781	ENSSSCP00000000895	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.596
ACAP1	SNX32	ENSSSCP00000020781	ENSSSCP00000066517	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.519
ACAP1	SNX6	ENSSSCP00000020781	ENSSSCP00000043080	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.519
ACAP2	APPL1	ENSSSCP00000053500	ENSSSCP00000038724	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2.	Adaptor protein phosphotyrosine interaction PH domain and leucine zipper containing 1.	0.596
ACAP2	APPL2	ENSSSCP00000053500	ENSSSCP00000000895	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.596
ACAP2	SH3GLB2	ENSSSCP00000053500	ENSSSCP00000027712	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2.	SH3 domain containing GRB2 like, endophilin B2.	0.483
ACAP3	APPL1	ENSSSCP00000003610	ENSSSCP00000038724	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3.	Adaptor protein phosphotyrosine interaction PH domain and leucine zipper containing 1.	0.596
ACAP3	APPL2	ENSSSCP00000003610	ENSSSCP00000000895	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.596
AMPH	APPL1	ENSSSCP00000020487	ENSSSCP00000038724	Uncharacterized protein.	Adaptor protein phosphotyrosine interaction PH domain and leucine zipper containing 1.	0.464
AMPH	ARFIP1	ENSSSCP00000020487	ENSSSCP00000052960	Uncharacterized protein.	ADP ribosylation factor interacting protein 1.	0.514
AMPH	ARHGAP26	ENSSSCP00000020487	ENSSSCP00000042157	Uncharacterized protein.	Rho GTPase activating protein 26.	0.789
AMPH	ARHGEF38	ENSSSCP00000020487	ENSSSCP00000022994	Uncharacterized protein.	Rho guanine nucleotide exchange factor 38.	0.661
AMPH	ASAP1	ENSSSCP00000020487	ENSSSCP00000050472	Uncharacterized protein.	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform 1.	0.490